RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NCOA4Q13772 614 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 IZUMO3Q5VZ72 239 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 CROCCP2Q86T23 111 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 TRIM11Q96F44 468 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 CDHR1Q96JP9 859 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 HOMER3Q9NSC5 361 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 FGFR1OP2Q9NVK5 253 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 PCNTO95613 3336 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 CCT8L1PA6NM43 557 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 PTK6Q13882 451 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
COL9A1-201ENST00000320755 RHBDF2Q6PJF5 856 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 SRRM1Q8IYB3 904 aaKnown RBP18.49■□□□□ 0.55
COL9A1-201ENST00000320755 GLIS1Q8NBF1 620 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 MAIP1Q8WWC4 291 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 NINJ2Q9NZG7 142 aa18.49■□□□□ 0.55
COL9A1-201ENST00000320755 OATP04181 439 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ETS1P14921 441 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 MARK3P27448 753 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 DALRD3Q5D0E6 543 aaKnown RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 DCAF15Q66K64 600 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 SCARA5Q6ZMJ2 495 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ZNF677Q86XU0 584 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 PAIP2Q9BPZ3 127 aaKnown RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 TMEM109Q9BVC6 243 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ACTR5Q9H9F9 607 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 MRPL47Q9HD33 250 aaKnown RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ZNF148Q9UQR1 794 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 H0YCG3 227 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 CLTAP09496 248 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 SRGAP2CP0DJJ0 459 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 FDX1P10109 184 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 BRAFP15056 766 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 OSTNP61366 133 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 PLCB3Q01970 1234 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 STXBP2Q15833 593 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 P3H1Q32P28 736 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 NUGGCQ68CJ6 796 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 DHX37Q8IY37 1157 aaKnown RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 TAB3Q8N5C8 712 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ZNF606Q8WXB4 792 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 PORCNQ9H237 461 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 CETPP11597 493 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 PSMC4P43686 418 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 RTP1P59025 263 aa18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ZNF280AP59817 542 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 CDR2LQ86X02 465 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ROPN1BQ9BZX4 212 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 FHDC1Q9C0D6 1143 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 ROPN1Q9HAT0 212 aaPredicted RBP18.48■□□□□ 0.55
COL9A1-201ENST00000320755 F8VP50 259 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 WEE2P0C1S8 567 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 BRD2P25440 801 aaKnown RBP18.47■□□□□ 0.55
COL9A1-201ENST00000320755 MPP2Q14168 576 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 DCUN1D2Q6PH85 259 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 DLK2Q6UY11 383 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 SUGP1Q8IWZ8 645 aaKnown RBP18.47■□□□□ 0.55
COL9A1-201ENST00000320755 IMPG2Q9BZV3 1241 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.47■□□□□ 0.55
COL9A1-201ENST00000320755 FER1L6Q2WGJ9 1857 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 SLCO2A1Q92959 643 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 MCEEQ96PE7 176 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 DNPEPQ9ULA0 475 aa18.47■□□□□ 0.55
COL9A1-201ENST00000320755 NFKBIEO00221 500 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 IFNB1P01574 187 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 MCCD1P59942 119 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-201ENST00000320755 KLF1Q13351 362 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-201ENST00000320755 TXNRD3NBQ6F5E7 133 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 MFSD5Q6N075 450 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 VSTM1Q6UX27 236 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 PLCD3Q8N3E9 789 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 FEZF2Q8TBJ5 459 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 SERPINB12Q96P63 405 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 RBM15Q96T37 977 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL9A1-201ENST00000320755 MTMR12Q9C0I1 747 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 ABCF3Q9NUQ8 709 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 NFASCO94856 1347 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 WDR81Q562E7 1941 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 A0A0B4J269 797 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 RASSF9O75901 435 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 KRT1P04264 644 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 MAN1A1P33908 653 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
COL9A1-201ENST00000320755 MTM1Q13496 603 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 CYP4A22Q5TCH4 519 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 SLFN12LQ6IEE8 588 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 MFSD7Q6UXD7 560 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 PIGWQ7Z7B1 504 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 FUKQ8N0W3 1084 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 CCDC89Q8N998 374 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 NAALADL1Q9UQQ1 740 aa18.46■□□□□ 0.55
COL9A1-201ENST00000320755 ASAP2O43150 1006 aa18.46■□□□□ 0.54
COL9A1-201ENST00000320755 MYL6P60660 151 aa18.46■□□□□ 0.54
COL9A1-201ENST00000320755 CLDN10P78369 228 aa18.46■□□□□ 0.54
COL9A1-201ENST00000320755 CCNG2Q16589 344 aa18.46■□□□□ 0.54
COL9A1-201ENST00000320755 VPS33BQ9H267 617 aa18.46■□□□□ 0.54
COL9A1-201ENST00000320755 DHX33Q9H6R0 707 aaKnown RBP18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms