RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SCN4AP35499 1836 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 GOLGA8IPA6NC78 632 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 GOLGA8JA6NMD2 632 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 GJB6O95452 261 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 MARK3P27448 753 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 CBWD6Q4V339 395 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 CBWD3Q5JTY5 395 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 CBWD5Q5RIA9 395 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 GJC2Q5T442 439 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 CDCA2Q69YH5 1023 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 RDM1Q8NG50 284 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ART4Q93070 314 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 PTPN18Q99952 460 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ZSWIM1Q9BR11 485 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 FAM167BQ9BTA0 163 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ROPN1BQ9BZX4 212 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ROPN1Q9HAT0 212 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 EIF4E1BA6NMX2 242 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 MIF4GDA9UHW6 222 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 EXOC3O60645 756 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 GH1P01241 217 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 PSMC2P35998 433 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 CST9Q5W186 159 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ASRGL1Q7L266 308 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 RHOT2Q8IXI1 618 aa18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ZNF483Q8TF39 744 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-201ENST00000316097 ADGRA3Q8IWK6 1321 aa18.27■□□□□ 0.51
SCAMP4-201ENST00000316097 MYH11P35749 1972 aa18.27■□□□□ 0.51
SCAMP4-201ENST00000316097 O00370 1275 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 KIF3CO14782 793 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 CALRP27797 417 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 COILP38432 576 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 DLG4P78352 724 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 MESDQ14696 234 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 SLC20A1Q8WUM9 679 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 DNAJC25-GNG10A0A024R161 153 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 TCF7P36402 384 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 STXBP4Q6ZWJ1 553 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 POP1Q99575 1024 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 PASKQ96RG2 1323 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 DENND3A2RUS2 1198 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 PYGMP11217 842 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 COMTP21964 271 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 CALCOCO2Q13137 446 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 LLGL1Q15334 1064 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 C11orf63Q6NUN7 778 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 TMEM161BQ8NDZ6 487 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 GPRC5AQ8NFJ5 357 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 CKAP2Q8WWK9 683 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 TGS1Q96RS0 853 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■■■ 64.1
SCAMP4-201ENST00000316097 DMAC2Q9NW81 257 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 APEX2Q9UBZ4 518 aa18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 MAFBQ9Y5Q3 323 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-201ENST00000316097 EME2A4GXA9 379 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 ATG7O95352 703 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 CETPP11597 493 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 GTF2BQ00403 316 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 TAF11Q15544 211 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 C2orf69Q8N8R5 385 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 SAAL1Q96ER3 474 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 KMT5AQ9NQR1 393 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 FRMD4BQ9Y2L6 1034 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 FTLP02792 175 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 MGAT5Q09328 741 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 MPP2Q14168 576 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 XKR3Q5GH77 459 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 TRMT10CQ7L0Y3 403 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 SERPINB12Q96P63 405 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 AGPAT1Q99943 283 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 PLCD4Q9BRC7 762 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 TRIM7Q9C029 511 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 ETNK1Q9HBU6 452 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 PDLIM7Q9NR12 457 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 DNAJC17Q9NVM6 304 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 PRKAG3Q9UGI9 489 aa18.25■□□□□ 0.51
SCAMP4-201ENST00000316097 ENO4A6NNW6 628 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 BRAFP15056 766 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 ADSSP30520 456 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 ABL2P42684 1182 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 GTF2A2P52657 109 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 DMP1Q13316 513 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 BLMHQ13867 455 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 CGB2Q6NT52 195 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 CPNE8Q86YQ8 564 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 POLR3FQ9H1D9 316 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 MROH8Q9H579 483 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 KLHL14Q9P2G3 628 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 MTUS1Q9ULD2 1270 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 CORO1CQ9ULV4 474 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 TBX20Q9UMR3 447 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 OATP04181 439 aa18.24■□□□□ 0.51
SCAMP4-201ENST00000316097 STX2P32856 288 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms