RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MYZAPP0CAP1 466 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 SCP2P22307 547 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 TNFAIP2Q03169 654 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 ADCY1Q08828 1119 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 MYBPC2Q14324 1141 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 HIC1Q14526 733 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 OLFML2BQ68BL8 750 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 SUGP1Q8IWZ8 645 aaKnown RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 OSMRQ99650 979 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 C11orf70Q9BRQ4 267 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 NUP85Q9BW27 656 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 SLC40A1Q9NP59 571 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 DDX20Q9UHI6 824 aaKnown RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 ALG6Q9Y672 507 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 UNC80Q8N2C7 3258 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 PTPRFP10586 1907 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 ADGRA2Q96PE1 1338 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 HBP1O60381 514 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 COMTP21964 271 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 RRM1P23921 792 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 RTP1P59025 263 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 LAMC2Q13753 1193 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 MXD4Q14582 209 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 PSMD6Q15008 389 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 AMHR2Q16671 573 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 MARCH8Q5T0T0 291 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 DCAF12L1Q5VU92 463 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 PLPPR4Q7Z2D5 763 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 NT5DC3Q86UY8 548 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 SLC17A8Q8NDX2 589 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 PARK7Q99497 189 aaKnown RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 KLHL11Q9NVR0 708 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 CACNG4Q9UBN1 327 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 MYH9P35579 1960 aaKnown RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 TCRBV7S2A1N4TA0A589 114 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 THAP12O43422 761 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 SKAP2O75563 359 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC172P0C7W6 258 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 ARF4P18085 180 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-202ENST00000315962 CTGFP29279 349 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 MBTD1Q05BQ5 628 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 TRPC3Q13507 836 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 GRIK4Q16099 956 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 SLFN12LQ6IEE8 588 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC121Q6ZUS5 278 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 B4GALNT4Q76KP1 1039 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC91Q7Z6B0 441 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 USP37Q86T82 979 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 MGARPQ8TDB4 240 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 TMC2Q8TDI7 906 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 RFFLQ8WZ73 363 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 KLC4Q9NSK0 619 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 DNAJC17Q9NVM6 304 aaKnown RBP8.1□□□□□ -1.11
TRIM55-202ENST00000315962 KLK14Q9P0G3 267 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 USTQ9Y2C2 406 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 DOCK3Q8IZD9 2030 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 DICER1Q9UPY3 1922 aaKnown RBP8.1□□□□□ -1.11
TRIM55-202ENST00000315962 WDR90Q96KV7 1748 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 ANKRD62A6NC57 917 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 STRNO43815 780 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 FAM189A1O60320 539 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 LGR5O75473 907 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 PGK1P00558 417 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 TMEM191BP0C7N4 346 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 AKAP5P24588 427 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 IFFO1Q0D2I5 559 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 CUL2Q13617 745 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 ZFYVE27Q5T4F4 411 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 SAPCD2Q86UD0 394 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 PPTC7Q8NI37 304 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 DDX1Q92499 740 aaKnown RBP8.1□□□□□ -1.11
TRIM55-202ENST00000315962 RAPGEF5Q92565 580 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 FAM167AQ96KS9 214 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 KATNBL1Q9H079 304 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 CDT1Q9H211 546 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 TJP2Q9UDY2 1190 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 HMGXB4Q9UGU5 601 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 COQ4Q9Y3A0 265 aa8.1□□□□□ -1.11
TRIM55-202ENST00000315962 LACTBL1A8MY62 500 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 SPOPO43791 374 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 ITGB3P05106 788 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 MMP3P08254 477 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 MYL3P08590 195 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 STAG3L1P0CL83 205 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 CD19P15391 556 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 PRLRP16471 622 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 GNA15P30679 374 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 GTF2H1P32780 548 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 PSMC4P43686 418 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 PTENP60484 403 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TNNC1P63316 161 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 GPC5P78333 572 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 CDR2Q01850 454 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 TRIM32Q13049 653 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 CRHR2Q13324 411 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 FAM133BQ5BKY9 247 aaKnown RBP8.09□□□□□ -1.11
TRIM55-202ENST00000315962 CYP4A22Q5TCH4 519 aa8.09□□□□□ -1.11
TRIM55-202ENST00000315962 JADE1Q6IE81 842 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms