RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 CUL2Q13617 745 aa17.31■□□□□ 0.36
TUBB3-201ENST00000315491 ZNF667Q5HYK9 610 aa17.31■□□□□ 0.36
TUBB3-201ENST00000315491 TNS4Q8IZW8 715 aa17.31■□□□□ 0.36
TUBB3-201ENST00000315491 ZNF560Q96MR9 790 aa17.31■□□□□ 0.36
TUBB3-201ENST00000315491 OGFRQ9NZT2 677 aa17.31■□□□□ 0.36
TUBB3-201ENST00000315491 ZMYND8Q9ULU4 1186 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-201ENST00000315491 F8VZ95 297 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 STAT1P42224 750 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 WDR5P61964 334 aaKnown RBP17.3■□□□□ 0.36
TUBB3-201ENST00000315491 TUSC3Q13454 348 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 TSR1Q2NL82 804 aaKnown RBP17.3■□□□□ 0.36
TUBB3-201ENST00000315491 C16orf59Q7L2K0 433 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 FAXDC2Q96IV6 333 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 CASD1Q96PB1 797 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 GPR88Q9GZN0 384 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
TUBB3-201ENST00000315491 MICAL3Q7RTP6 2002 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 PODXLO00592 558 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 UPP2O95045 317 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 FGBP02675 491 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 RPL9P32969 192 aaKnown RBP17.3■□□□□ 0.36
TUBB3-201ENST00000315491 PNPLA4P41247 253 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 GATMP50440 423 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 SFMBT2Q5VUG0 894 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 OTOP2Q7RTS6 562 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 RSPH1Q8WYR4 309 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 SYN2Q92777 582 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-201ENST00000315491 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-201ENST00000315491 TBC1D13Q9NVG8 400 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 POLIQ9UNA4 740 aa17.3■□□□□ 0.36
TUBB3-201ENST00000315491 TTC3P53804 2025 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 P4HA1P13674 534 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 SOX5P35711 763 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 ASPAP45381 313 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 TAF6P49848 677 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 CLCNKBP51801 687 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 DEFB103AP81534 67 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 E4F1Q66K89 784 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-201ENST00000315491 PSRC1Q6PGN9 363 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-201ENST00000315491 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 SHC3Q92529 594 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 TOP1MTQ969P6 601 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 JAKMIP2Q96AA8 810 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
TUBB3-201ENST00000315491 UROC1Q96N76 676 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 ZNHIT6Q9NWK9 470 aaKnown RBP17.29■□□□□ 0.36
TUBB3-201ENST00000315491 CACNG4Q9UBN1 327 aa17.29■□□□□ 0.36
TUBB3-201ENST00000315491 TBKBP1A7MCY6 615 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 RIOK3O14730 519 aaKnown RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 DDHD2O94830 711 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 PNMA6AP0CW24 399 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 KCNJ6P48051 423 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 EPHB4P54760 987 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 TNNC1P63316 161 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 RNASELQ05823 741 aaKnown RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 DSC1Q08554 894 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 ASIC2Q16515 512 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 SV2CQ496J9 727 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 SCARA5Q6ZMJ2 495 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 ZNF280BQ86YH2 543 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 GPIHBP1Q8IV16 184 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 FAM193BQ96PV7 902 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 MRPL9Q9BYD2 267 aaKnown RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 AIPL1Q9NZN9 384 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 FECHP22830 423 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 MEA1Q16626 185 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 UPP1Q16831 310 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 TMEM240Q5SV17 173 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 WDR59Q6PJI9 974 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 FMNL3Q8IVF7 1028 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 CCDC112Q8NEF3 446 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 BAG1Q99933 345 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-201ENST00000315491 BCO2Q9BYV7 579 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 KCNF1Q9H3M0 494 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 SNX9Q9Y5X1 595 aa17.28■□□□□ 0.36
TUBB3-201ENST00000315491 ZBBXA8MT70 800 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 KPNA7A9QM74 516 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 SPTLC1O15269 473 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 NRDCO43847 1150 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 DGKIO75912 1065 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 GFPT2O94808 682 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 FERP16591 822 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 ACO1P21399 889 aaKnown RBP17.27■□□□□ 0.35
TUBB3-201ENST00000315491 LILRA4P59901 499 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 CCZ1BP86790 482 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 CCZ1P86791 482 aaPredicted RBP17.27■□□□□ 0.35
TUBB3-201ENST00000315491 TMEM139Q8IV31 216 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 COLGALT2Q8IYK4 626 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 UBR7Q8N806 425 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.27■□□□□ 0.352e-6■□□□□ 8.5
TUBB3-201ENST00000315491 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 SMYD3Q9H7B4 428 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 CYP3A43Q9HB55 503 aa17.27■□□□□ 0.35
TUBB3-201ENST00000315491 B4GALT3O60512 393 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms