RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FAM26FQ5R3K3 315 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 PPM1LQ5SGD2 360 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 LIN9Q5TKA1 542 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 ELMSAN1Q6PJG2 1045 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 GRASPQ7Z6J2 395 aaPredicted RBP15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 PLCD3Q8N3E9 789 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 FAM212AQ96EL1 285 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 LRRC27Q9C0I9 530 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 TMEM206Q9H813 350 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 HCFC1R1Q9NWW0 138 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 DNMT3BQ9UBC3 853 aaKnown RBP15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 TSC2P49815 1807 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 A0A1B0GVL5 298 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 H7C4K7 107 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 EXTL3O43909 919 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 PDGFBP01127 241 aaPredicted RBP15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 CYP11A1P05108 521 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 TYMPP19971 482 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 CTXN3Q4LDR2 81 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 ZNF280DQ6N043 979 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 RTL10Q7L3V2 364 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 CBWD2Q8IUF1 395 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 TCEAL8Q8IYN2 117 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 C1orf127Q8N9H9 656 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 APPL2Q8NEU8 664 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 OR10T2Q8NGX3 314 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 RSAD2Q8WXG1 361 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 PAGE5Q96GU1 130 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 SENP8Q96LD8 212 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 TMEM209Q96SK2 561 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 PCIF1Q9H4Z3 704 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 KCNK12Q9HB15 430 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 FAM13BQ9NYF5 915 aa15.81■□□□□ 0.12
PPP1CA-201ENST00000312989 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 ANHXE9PGG2 379 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 XPOTO43592 962 aaKnown RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 IL18RAPO95256 599 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 OR4Q2P0C623 313 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 AFMP43652 599 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 KRT85P78386 507 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 AMPD3Q01432 767 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 YWHAHQ04917 246 aaPredicted RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 MTMR3Q13615 1198 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 SLC5A9Q2M3M2 681 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 TPGS2Q68CL5 300 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 RNF19BQ6ZMZ0 732 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 NT5DC4Q86YG4 428 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 KIAA0895Q8NCT3 520 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 ITFG1Q8TB96 612 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 ACSF2Q96CM8 615 aaPredicted RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 SPATA32Q96LK8 384 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 AGPAT3Q9NRZ7 376 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 DPP3Q9NY33 737 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 RBAKQ9NYW8 714 aaPredicted RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 AFF4Q9UHB7 1163 aaKnown RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 SIX4Q9UIU6 781 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 INSL5Q9Y5Q6 135 aa15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 MTCL1Q9Y4B5 1905 aaKnown RBP15.8■□□□□ 0.12
PPP1CA-201ENST00000312989 UBE4BO95155 1302 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 LAMP2P13473 410 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 NDUFA8P51970 172 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 STK4Q13043 487 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 HTR4Q13639 388 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 PRSS36Q5K4E3 855 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 UBALD2Q8IYN6 164 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 GPD1LQ8N335 351 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 PIDD1Q9HB75 910 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 PDE11AQ9HCR9 933 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 AVENQ9NQS1 362 aaPredicted RBP15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 HSPBP1Q9NZL4 362 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 ZNF318Q5VUA4 2279 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 NOTCH4Q99466 2003 aa15.79■□□□□ 0.12
PPP1CA-201ENST00000312989 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 NARSO43776 548 aaKnown RBP15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 MOSPD3O75425 235 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 LDHAP00338 332 aaKnown RBP15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 FSHRP23945 695 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 CCR2P41597 374 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 ARPP19P56211 112 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 ARMCX5Q6P1M9 558 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 NPAS3Q8IXF0 933 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 SYCP3Q8IZU3 236 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 TTC9BQ8N6N2 239 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 OR5B17Q8NGF7 314 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 FGF13Q92913 245 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 RPP25Q9BUL9 199 aaKnown RBP15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 DNAJC25Q9H1X3 360 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 SLC39A2Q9NP94 309 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 CEP72Q9P209 647 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 DUSP12Q9UNI6 340 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 DOCK8Q8NF50 2099 aa15.78■□□□□ 0.12
PPP1CA-201ENST00000312989 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms