RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 FAM161BQ96MY7 647 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 KIAA1586Q9HCI6 787 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.09■□□□□ 0.65
SPSB4-201ENST00000310546 SFI1A8K8P3 1242 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 ESRRAP11474 423 aaPredicted RBP19.09■□□□□ 0.65
SPSB4-201ENST00000310546 MAP7Q14244 749 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 DAB2IPQ5VWQ8 1189 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 LVRNQ6Q4G3 990 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 NSMFQ6X4W1 530 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 ST13P4Q8IZP2 240 aaPredicted RBP19.09■□□□□ 0.65
SPSB4-201ENST00000310546 CLIC5Q9NZA1 410 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 GTPBP10A4D1E9 387 aaKnown RBP19.08■□□□□ 0.65
SPSB4-201ENST00000310546 RNASEH1O60930 286 aaKnown RBP19.08■□□□□ 0.65
SPSB4-201ENST00000310546 MED24O75448 989 aa19.08■□□□□ 0.65
SPSB4-201ENST00000310546 GAS8O95995 478 aa19.08■□□□□ 0.65
SPSB4-201ENST00000310546 RRM1P23921 792 aa19.08■□□□□ 0.65
SPSB4-201ENST00000310546 PGM1P36871 562 aa19.08■□□□□ 0.65
SPSB4-201ENST00000310546 FMO5P49326 533 aa19.08■□□□□ 0.65
SPSB4-201ENST00000310546 CDK8P49336 464 aa19.08■□□□□ 0.65
SPSB4-201ENST00000310546 DNAJC1Q96KC8 554 aaKnown RBP19.08■□□□□ 0.65
SPSB4-201ENST00000310546 SUDS3Q9H7L9 328 aaPredicted RBP19.08■□□□□ 0.65
SPSB4-201ENST00000310546 ALG13Q9NP73 1137 aaKnown RBP19.08■□□□□ 0.65
SPSB4-201ENST00000310546 SERPINB3P29508 390 aa19.08■□□□□ 0.64
SPSB4-201ENST00000310546 SLC12A3P55017 1021 aa19.08■□□□□ 0.64
SPSB4-201ENST00000310546 LRRC36Q1X8D7 754 aa19.08■□□□□ 0.64
SPSB4-201ENST00000310546 PTCD3Q96EY7 689 aaKnown RBP19.08■□□□□ 0.64
SPSB4-201ENST00000310546 ANKFY1Q9P2R3 1169 aa19.08■□□□□ 0.64
SPSB4-201ENST00000310546 USP17L5A8MUK1 530 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 MAPK6Q16659 721 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 RGS9BPQ6ZS82 235 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 LRRC47Q8N1G4 583 aaKnown RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 NAT14Q8WUY8 206 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 DDX27Q96GQ7 796 aaKnown RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 MPP4Q96JB8 637 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 RBM15Q96T37 977 aaKnown RBP eCLIP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ECSITQ9BQ95 431 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 DDX43Q9NXZ2 648 aaKnown RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 EURLQ9NYK6 297 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 APEX2Q9UBZ4 518 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ANGPTL2Q9UKU9 493 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ZBED4O75132 1171 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 SEPT7Q16181 437 aaKnown RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 SYT2Q8N9I0 419 aaPredicted RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 C12orf50Q8NA57 414 aaPredicted RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 CD101Q93033 1021 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 OLFM3Q96PB7 478 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 MIS12Q9H081 205 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 CYLDQ9NQC7 956 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 KANSL3Q9P2N6 904 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ZMYM2Q9UBW7 1377 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 NRXN2Q9P2S2 1712 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 A0A1W2PPM1 405 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 USP1O94782 785 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ASLP04424 464 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 TRIM42Q8IWZ5 723 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 CFAP61Q8NHU2 1237 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ABTB1Q969K4 478 aaPredicted RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 EYA3Q99504 573 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 RUSC1Q9BVN2 902 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 INTS2Q9H0H0 1204 aaKnown RBP19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ZNF232Q9UNY5 417 aa19.07■□□□□ 0.64
SPSB4-201ENST00000310546 ESYT2A0FGR8 921 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 C2orf71A6NGG8 1288 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 SLC16A3O15427 465 aaKnown RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 OR6B1O95007 311 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 VAV1P15498 845 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 MAGEA4P43358 317 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 SPDYAQ5MJ70 313 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 CDC42EP5Q6NZY7 148 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 RDH13Q8NBN7 331 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 AGBL1Q96MI9 1066 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 IWS1Q96ST2 819 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 NUP85Q9BW27 656 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 C12orf65Q9H3J6 166 aaKnown RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 ARMCX1Q9P291 453 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 ZNF510Q9Y2H8 683 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 COL11A2P13942 1736 aaPredicted RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 ROBO3Q96MS0 1386 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 CLRN2A0PK11 232 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 PRPF4O43172 522 aaKnown RBP eCLIP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 ANPEPP15144 967 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 HADHBP55084 474 aaKnown RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 TTC7BQ86TV6 843 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 SATL1Q86VE3 508 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 STKLD1Q8NE28 680 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 ZNF564Q8TBZ8 553 aaPredicted RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 LENG1Q96BZ8 264 aaPredicted RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 EBF3Q9H4W6 596 aa19.06■□□□□ 0.64
SPSB4-201ENST00000310546 TDRD3Q9H7E2 651 aaKnown RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 SMG5Q9UPR3 1016 aaKnown RBP19.06■□□□□ 0.64
SPSB4-201ENST00000310546 ITGA2BP08514 1039 aa19.05■□□□□ 0.64
SPSB4-201ENST00000310546 ADRA1DP25100 572 aa19.05■□□□□ 0.64
SPSB4-201ENST00000310546 PSMC2P35998 433 aaKnown RBP19.05■□□□□ 0.64
SPSB4-201ENST00000310546 P3H1Q32P28 736 aa19.05■□□□□ 0.64
SPSB4-201ENST00000310546 HYIQ5T013 277 aa19.05■□□□□ 0.64
SPSB4-201ENST00000310546 SLC5A5Q92911 643 aa19.05■□□□□ 0.64
SPSB4-201ENST00000310546 NDE1Q9NXR1 346 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms