RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 SPATA1Q5VX52 437 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 TPGS2Q68CL5 300 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 MTSS1LQ765P7 747 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 IQUBQ8NA54 791 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 FLCNQ8NFG4 579 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 OXCT2Q9BYC2 517 aaPredicted RBP11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 CUEDC2Q9H467 287 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 ASB7Q9H672 318 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 FAM13BQ9NYF5 915 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 MRPS23Q9Y3D9 190 aaKnown RBP11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 C2CD2Q9Y426 696 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 TIMM13Q9Y5L4 95 aaPredicted RBP11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 INSL5Q9Y5Q6 135 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
HMGN1P35-201ENST00000303758 ABLIM3O94929 683 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 LDHAP00338 332 aaKnown RBP11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ADRB2P07550 413 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 SRFP11831 508 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 PTPN2P17706 415 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 PAX3P23760 479 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 CASP5P51878 434 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ASIC1P78348 528 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 NHLH1Q02575 133 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ADCY1Q08828 1119 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 KCNA1Q09470 495 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 HTR4Q13639 388 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 IER5LQ5T953 404 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 C9orf57Q5W0N0 161 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 OVOS1Q6IE37 1185 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 IQCEQ6IPM2 695 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ARMCX5Q6P1M9 558 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 TCEAL8Q8IYN2 117 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 SIX5Q8N196 739 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 PRSS33Q8NF86 280 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ITFG1Q8TB96 612 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ING5Q8WYH8 240 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 FGF13Q92913 245 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 ZNF560Q96MR9 790 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 CORO1BQ9BR76 489 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 TMEM206Q9H813 350 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 DNMT3BQ9UBC3 853 aaKnown RBP11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 AFF4Q9UHB7 1163 aaKnown RBP11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 CFAP45Q9UL16 551 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 KCNH3Q9ULD8 1083 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 STYXL1Q9Y6J8 313 aa11.77□□□□□ -0.53
HMGN1P35-201ENST00000303758 SCN1AP35498 2009 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 NOTCH4Q99466 2003 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 FRMD3A2A2Y4 597 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 PPEF2O14830 753 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 RHOP08100 348 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 OR4Q2P0C623 313 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 TYMPP19971 482 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 GARTP22102 1010 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 AARSP49588 968 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 TAF6P49848 677 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 CLCN6P51797 869 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 LILRA4P59901 499 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 POU5F1Q01860 360 aaKnown RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 ATL3Q6DD88 541 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 RNF19BQ6ZMZ0 732 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 PDZD4Q76G19 769 aaPredicted RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 METTL23Q86XA0 190 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 NT5DC4Q86YG4 428 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 SLC44A3Q8N4M1 653 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 ST13P5Q8NFI4 369 aaPredicted RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 SENP8Q96LD8 212 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 ZNF512Q96ME7 567 aaPredicted RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 STRA6Q9BX79 667 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 MAGEF1Q9HAY2 307 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 DPP3Q9NY33 737 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 CA14Q9ULX7 337 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 MAFFQ9ULX9 164 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 R3HCC1Q9Y3T6 440 aaKnown RBP11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 MUC6Q6W4X9 2439 aa11.76□□□□□ -0.53
HMGN1P35-201ENST00000303758 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 ANHXE9PGG2 379 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 ZNF197O14709 1029 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 POLR2DO15514 142 aaKnown RBP11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 OAZ2O95190 189 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 SEC24AO95486 1093 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 ADSSP30520 456 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 NUBP1P53384 320 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 TWF1Q12792 350 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 PLD1Q13393 1074 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 E2F4Q16254 413 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 SV2CQ496J9 727 aa11.75□□□□□ -0.53
HMGN1P35-201ENST00000303758 CYP4A22Q5TCH4 519 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms