RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CYP7B1O75881 506 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 SLC25A27O95847 323 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 HLA-DRAP01903 254 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 PLD1Q13393 1074 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 MEI1Q5TIA1 1274 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 RASIP1Q5U651 963 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 NT5DC3Q86UY8 548 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 FAM124AQ86V42 546 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 ENOX1Q8TC92 643 aaKnown RBP8.2□□□□□ -1.1
SCN9A-201ENST00000303354 DPF2Q92785 391 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 RUBCNLQ9H714 662 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 MAN1C1Q9NR34 630 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 ZCCHC11Q5TAX3 1644 aaKnown RBP8.2□□□□□ -1.1
SCN9A-201ENST00000303354 CNTNAP2Q9UHC6 1331 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 SLC12A8A0AV02 714 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 TTI1O43156 1089 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 TMCC1O94876 653 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 CAP2P40123 477 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 SLC16A1P53985 500 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 HIC1Q14526 733 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 ERAP2Q6P179 960 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 ABTB1Q969K4 478 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-201ENST00000303354 RELTQ969Z4 430 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 MTMR12Q9C0I1 747 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 AURKCQ9UQB9 309 aa8.2□□□□□ -1.1
SCN9A-201ENST00000303354 SCAMP1O15126 338 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MYO1DO94832 1006 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 EFTUD2Q15029 972 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 IZUMO3Q5VZ72 239 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 KCNV1Q6PIU1 500 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TBC1D1Q86TI0 1168 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 CINPQ9BW66 212 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 AAASQ9NRG9 546 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TUBE1Q9UJT0 475 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 DBR1Q9UK59 544 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 NPC1L1Q9UHC9 1359 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MYO5CQ9NQX4 1742 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 GMFGO60234 142 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TUBBP07437 444 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 ZNF177Q13360 481 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TFDP2Q14188 446 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 USP10Q14694 798 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SNX17Q15036 470 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 NOTUMQ6P988 496 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 CCDC137Q6PK04 289 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 IFNEQ86WN2 208 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 ZNF34Q8IZ26 560 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 RUNDC3BQ96NL0 473 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 XPO7Q9UIA9 1087 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 USP42Q9H9J4 1324 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TTC37Q6PGP7 1564 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MYMKA6NI61 221 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 HBP1O60381 514 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 PSMC6P62333 389 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 DCP1BQ8IZD4 617 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 ZNF512BQ96KM6 892 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MYPNQ86TC9 1320 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 STXBP3O00186 592 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 CAPZA2P47755 286 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 BEND6Q5SZJ8 279 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MARK2Q7KZI7 788 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 VN1R5Q7Z5H4 357 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TFAP2DQ7Z6R9 452 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 VSTM4Q8IW00 320 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 GPR152Q8TDT2 470 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SLC39A10Q9ULF5 831 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 GTPBP10A4D1E9 387 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SLC37A4O43826 429 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 STAG3L1P0CL83 205 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 PRKCQQ04759 706 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 CHMP1BQ7LBR1 199 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 RDM1Q8NG50 284 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SCFD1Q8WVM8 642 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 PITPNM3Q9BZ71 974 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MAGEB5Q9BZ81 275 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 CPSF1Q10570 1443 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 PJA2O43164 708 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SETSIPP0DME0 302 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 HIF1AQ16665 826 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 KCTD19Q17RG1 926 aaPredicted RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 BRD8Q9H0E9 1235 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 PIF1Q9H611 641 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 CDHR2Q9BYE9 1310 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MFAP3LO75121 409 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SMARCA1P28370 1054 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 KRT80Q6KB66 452 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 C16orf86Q6ZW13 317 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 SLC35G2Q8TBE7 412 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 ADAM32Q8TC27 787 aa8.19□□□□□ -1.1
SCN9A-201ENST00000303354 MTFMTQ96DP5 389 aaKnown RBP8.19□□□□□ -1.1
SCN9A-201ENST00000303354 TRIM55Q9BYV6 548 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms