RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 TTC7BQ86TV6 843 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 TUBGCP5Q96RT8 1024 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 POLR3CQ9BUI4 534 aaPredicted RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 PLVAPQ9BX97 442 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 TMX4Q9H1E5 349 aaPredicted RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 TAS2R1Q9NYW7 299 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 HEY2Q9UBP5 337 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 F5H6K3 240 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 MAP3K7O43318 606 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 CALCAP01258 141 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 KLRC2P26717 231 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 PSMC4P43686 418 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 PPP2R5CQ13362 524 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 THOC5Q13769 683 aaKnown RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 LRRC23Q53EV4 343 aaPredicted RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 ANKS1BQ7Z6G8 1248 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 NCSTNQ92542 709 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 MCUR1Q96AQ8 359 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 CFAP57Q96MR6 1250 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 G3BP2Q9UN86 482 aaKnown RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 ZWINTO95229 277 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 FDX1P10109 184 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 PLS3P13797 630 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 SERPINB3P29508 390 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 SNAP25P60880 206 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 PHLDB2Q86SQ0 1253 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 SESTD1Q86VW0 696 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 CCDC89Q8N998 374 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 PPFIBP2Q8ND30 876 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ZNF398Q8TD17 642 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 STMN2Q93045 179 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ELMO3Q96BJ8 720 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ARHGEF4Q9NR80 690 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ANKFY1Q9P2R3 1169 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 SMCHD1A6NHR9 2005 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 C2orf71A6NGG8 1288 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 PIAS1O75925 651 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 TROVE2P10155 538 aaKnown RBP eCLIP11.51□□□□□ -0.57
ZNF558-201ENST00000301475 BMP3P12645 472 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ETS2P15036 469 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 KRT4P19013 534 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 CETN2P41208 172 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 RTP1P59025 263 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 AP3B2Q13367 1082 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 GSTA3Q16772 222 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 PABPC1LQ4VXU2 614 aaKnown RBP11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ODR4Q5SWX8 454 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 TPH2Q8IWU9 490 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 VPS52Q8N1B4 723 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 PPM1KQ8N3J5 372 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 HSD17B14Q9BPX1 270 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ASCC2Q9H1I8 757 aaPredicted RBP11.51□□□□□ -0.57
ZNF558-201ENST00000301475 ZNF212Q9UDV6 495 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 UMODL1Q5DID0 1318 aa11.51□□□□□ -0.57
ZNF558-201ENST00000301475 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 CHMP2AO43633 222 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 RPS6KA4O75676 772 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 CYP11B1P15538 503 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 MAPK4P31152 587 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 VAMP7P51809 220 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 EFTUD2Q15029 972 aaKnown RBP eCLIP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 SYDE2Q5VT97 1194 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 SLC9A9Q8IVB4 645 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 DYDC2Q96IM9 177 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 NSL1Q96IY1 281 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 FAM20AQ96MK3 541 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 ALG13Q9NP73 1137 aaKnown RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 KCNQ5Q9NR82 932 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 DDX43Q9NXZ2 648 aaKnown RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 SENP1Q9P0U3 644 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 WRAP73Q9P2S5 460 aaPredicted RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 UBE4BO95155 1302 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
ZNF558-201ENST00000301475 PIK3CDO00329 1044 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 RAD21O60216 631 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 ZBED4O75132 1171 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 BANF1O75531 89 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 SLITRK3O94933 977 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 ZSCAN5DPP0CG00 497 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 CENPCQ03188 943 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 C2CD6Q53TS8 623 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 RASIP1Q5U651 963 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 IZUMO2Q6UXV1 221 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 SYCP3Q8IZU3 236 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 FBXO27Q8NI29 283 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 SHC3Q92529 594 aa11.5□□□□□ -0.57
ZNF558-201ENST00000301475 VPS37BQ9H9H4 285 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms