RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 KLHL11Q9NVR0 708 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
TVP23A-201ENST00000299866 HNRNPCL1O60812 293 aaKnown RBP13.77□□□□□ -0.2
TVP23A-201ENST00000299866 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.2
TVP23A-201ENST00000299866 CYP11B1P15538 503 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 CFAP157Q5JU67 520 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 FAM210AQ96ND0 272 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 FIZ1Q96SL8 496 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 TRIM55Q9BYV6 548 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.2
TVP23A-201ENST00000299866 FAM192AQ9GZU8 254 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 VAV3Q9UKW4 847 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 PHLPP1O60346 1717 aa13.77□□□□□ -0.2
TVP23A-201ENST00000299866 TYROBPO43914 113 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 CD58P19256 250 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 RXRBP28702 533 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 FAM71AQ8IYT1 594 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 FAM20AQ96MK3 541 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 SETDB2Q96T68 719 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 CBWD1Q9BRT8 395 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 ASCC2Q9H1I8 757 aaPredicted RBP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 VCX3BQ9H321 246 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 VCX3AQ9NNX9 186 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 K7ENM7 598 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 KRT5P13647 590 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 MXI1P50539 228 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 SLC10A5Q5PT55 438 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 TRMT1LQ7Z2T5 733 aaKnown RBP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 TAB3Q8N5C8 712 aaPredicted RBP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 CFAP61Q8NHU2 1237 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 TCP10LQ8TDR4 215 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 TMEM120AQ9BXJ8 343 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 SLC17A7Q9P2U7 560 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 ZNF212Q9UDV6 495 aa13.77□□□□□ -0.21
TVP23A-201ENST00000299866 DDX60LQ5H9U9 1706 aaKnown RBP13.77□□□□□ -0.21
TVP23A-201ENST00000299866 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 USP1O94782 785 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 SLITRK3O94933 977 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 Q4G0T1 1027 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 ZNF148Q9UQR1 794 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 PI4K2BG5E9Z4 385 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 PIK3CDO00329 1044 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 TBX3O15119 743 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 ABHD2P08910 425 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 SCNN1BP51168 640 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 NFIL3Q16649 462 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 LRRC36Q1X8D7 754 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 ACAD10Q6JQN1 1059 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 CLPTM1LQ96KA5 538 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 GLT8D2Q9H1C3 349 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 MANSC1Q9H8J5 431 aa13.76□□□□□ -0.21
TVP23A-201ENST00000299866 B2RBV5 119 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 OPHN1O60890 802 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 UBXN2AP68543 259 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 PDIA2Q13087 525 aaKnown RBP13.75□□□□□ -0.21
TVP23A-201ENST00000299866 GPS1Q13098 491 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 CPA5Q8WXQ8 436 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 DDX27Q96GQ7 796 aaKnown RBP13.75□□□□□ -0.21
TVP23A-201ENST00000299866 FNBP1Q96RU3 617 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 TSSK1BQ9BXA7 367 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 OSBPL8Q9BZF1 889 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SENP1Q9P0U3 644 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 ANGPTL2Q9UKU9 493 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 hCG_2014768A0A024R1R8 64 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 IGKV6D-41A0A0C4DH26 115 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 KRT10P13645 584 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 CCNFP41002 786 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 LMNB2Q03252 620 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 TRIM74Q86UV6 250 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SLC25A41Q8N5S1 370 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 HAUS1Q96CS2 278 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 LARSQ9P2J5 1176 aaKnown RBP13.75□□□□□ -0.21
TVP23A-201ENST00000299866 ARFGEF1Q9Y6D6 1849 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 H3BRJ5 948 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 IFNB1P01574 187 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 ARSEP51690 589 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 MFAP3P55082 362 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 CENPCQ03188 943 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 AP3B2Q13367 1082 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 CCNG2Q16589 344 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 ANKS1BQ7Z6G8 1248 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 FBXO27Q8NI29 283 aa13.75□□□□□ -0.21
TVP23A-201ENST00000299866 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms