RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CYBBP04839 570 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HDAC4P56524 1084 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF200P98182 395 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RAD51Q06609 339 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 STAT4Q14765 748 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MROH9Q5TGP6 573 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SGF29Q96ES7 293 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 STK33Q9BYT3 514 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NCF1BA6NI72 391 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NCF1CA8MVU1 366 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NCF1P14598 390 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ITGA8P53708 1063 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CCZ1BP86790 482 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CCZ1P86791 482 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SLC18A3Q16572 532 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GLRA4Q5JXX5 417 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 LVRNQ6Q4G3 990 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C3orf62Q6ZUJ4 267 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MDM1Q8TC05 714 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ARHGEF26Q96DR7 871 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CALR3Q96L12 384 aaKnown RBP14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 EPN3Q9H201 632 aa14.22□□□□□ -0.13
CHRFAM7A-201ENST00000299847 A0A1W2PQC6 194 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KDM1AO60341 852 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PCYT1AP49585 367 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NME5P56597 212 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 E4F1Q66K89 784 aaPredicted RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 EFCAB12Q6NXP0 572 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TARSL2A2RTX5 802 aaKnown RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 STXBP3O00186 592 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF543Q08ER8 600 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GPAT2Q6NUI2 795 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 XPO1O14980 1071 aaKnown RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SLC1A1P43005 524 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RBP5P82980 135 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SP8Q8IXZ3 490 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CDYLQ9Y232 598 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SLC16A3O15427 465 aaKnown RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ARHGEF9O43307 516 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HLA-DRAP01903 254 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HIST1H2AGP0C0S8 130 aaPredicted RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HIST1H2ADP20671 130 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GRIN1Q05586 938 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ICE2Q659A1 982 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PRPF39Q86UA1 669 aaKnown RBP14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HIST1H2AHQ96KK5 128 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HIST1H2AJQ99878 128 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 H2AFJQ9BTM1 129 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PFASO15067 1338 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 LAMC1P11047 1609 aa14.21□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF197O14709 1029 aa14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SRP72O76094 671 aaKnown RBP14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SRGNP10124 158 aa14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ALX1Q15699 326 aa14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ANGEL2Q5VTE6 544 aaKnown RBP14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TMEM39BQ9GZU3 492 aa14.21□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EPB42P16452 691 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EFNA5P52803 228 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 INPP5AQ14642 412 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RAD9BQ6WBX8 426 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PALMDQ9NP74 551 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PITPNM2Q9BZ72 1349 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 LOC100653049A0A140TA62 436 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KRT34O76011 436 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HOXD10P28358 340 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MAPRE2Q15555 327 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CHI3L2Q15782 390 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DEPDC1Q5TB30 811 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 OLFML2BQ68BL8 750 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SPATA18Q8TC71 538 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ERP27Q96DN0 273 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 VPS50Q96JG6 964 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HSPA1AP0DMV8 641 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HSPA1BP0DMV9 641 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NEK2P51955 445 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 OVGP1Q12889 678 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ATF7IP2Q5U623 682 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KIAA2013Q8IYS2 634 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SHCBP1Q8NEM2 672 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SH3TC2Q8TF17 1288 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KAT2BQ92831 832 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PRR12Q9ULL5 1215 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ARL2BPQ9Y2Y0 163 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MRPL42Q9Y6G3 142 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 A0A1B0GTH6 734 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PLEKP08567 350 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PLA2G4AP47712 749 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 BYSLQ13895 437 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NBPF20Q3BBV1 942 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ADSSL1Q8N142 457 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SRPK1Q96SB4 655 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms