RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PSMD14O00487 310 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 ATP6V1G2O95670 118 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 RECQLP46063 649 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 CDK8P49336 464 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 ITGA8P53708 1063 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 CACNA2D1P54289 1103 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 PTPN12Q05209 780 aaKnown RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 PUDPQ08623 228 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TSC22D1Q15714 1073 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TRIM72Q6ZMU5 477 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 UBE2Q1Q7Z7E8 422 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 SCN4BQ8IWT1 228 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 SCFD1Q8WVM8 642 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 UBE2OQ9C0C9 1292 aaKnown RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 PYGMP11217 842 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 LAMC2Q13753 1193 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 ARMCX4Q5H9R4 360 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 PKN3Q6P5Z2 889 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 FGD2Q7Z6J4 655 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 ASIC4Q96FT7 647 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 KCNQ4P56696 695 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 KCNK10P57789 538 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TP53BP2Q13625 1128 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 ZNF568Q3ZCX4 644 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TTC23LQ6PF05 361 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TC2NQ8N9U0 490 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 RMDN1Q96DB5 314 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 SENP7Q9BQF6 1050 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 IPPQ9Y573 584 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TTC37Q6PGP7 1564 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 TTC39BQ5VTQ0 682 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 CLEC17AQ6ZS10 378 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 HNRNPLLQ8WVV9 542 aaKnown RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 FAM49AQ9H0Q0 323 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 GUCA1CO95843 209 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 STAT3P40763 770 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 AP3B2Q13367 1082 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 RNF219Q5W0B1 726 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 SETD3Q86TU7 594 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-201ENST00000299333 SNX13Q9Y5W8 968 aa15.54■□□□□ 0.08
SCN3B-201ENST00000299333 HUS1O60921 280 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 SNRPAP09012 282 aaKnown RBP15.53■□□□□ 0.08
SCN3B-201ENST00000299333 C16orf72Q14CZ0 275 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 RSBN1Q5VWQ0 802 aaPredicted RBP15.53■□□□□ 0.08
SCN3B-201ENST00000299333 AP5M1Q9H0R1 490 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 CDY2AQ9Y6F7 541 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 CDY1Q9Y6F8 540 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 ADGRA2Q96PE1 1338 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 KLHL18O94889 574 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 MFN2O95140 757 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 ZNF23P17027 643 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 PSMA4P25789 261 aaKnown RBP15.53■□□□□ 0.08
SCN3B-201ENST00000299333 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 SCUBE1Q8IWY4 988 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 HPS3Q969F9 1004 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 TMEM117Q9H0C3 514 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 DDX18Q9NVP1 670 aaKnown RBP15.53■□□□□ 0.08
SCN3B-201ENST00000299333 FHOD1Q9Y613 1164 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 XDHP47989 1333 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L5A8MUK1 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L15C9J2P7 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L13C9JLJ4 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L11C9JVI0 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L18D6R9N7 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L22D6RA61 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L17D6RBQ6 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L19D6RCP7 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L20D6RJB6 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 LRPAP1P30533 357 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 JAK3P52333 1124 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L24Q0WX57 530 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP17L6PQ6QN14 398 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 MFN1Q8IWA4 741 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 MMGT1Q8N4V1 131 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 USP38Q8NB14 1042 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 FUT8Q9BYC5 575 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 PCDHGA3Q9Y5H0 932 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 CCT3P49368 545 aaKnown RBP15.53■□□□□ 0.08
SCN3B-201ENST00000299333 TAP1Q03518 808 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 MAPK6Q16659 721 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 CPA5Q8WXQ8 436 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 PTPRN2Q92932 1015 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 ORAI2Q96SN7 254 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 ERP44Q9BS26 406 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 NOL6Q9H6R4 1146 aaKnown RBP15.53■□□□□ 0.08
SCN3B-201ENST00000299333 PPCSQ9HAB8 311 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 SPATA2Q9UM82 520 aa15.53■□□□□ 0.08
SCN3B-201ENST00000299333 LMBRD2Q68DH5 695 aaPredicted RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 FRMD5Q7Z6J6 570 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 UNC45BQ8IWX7 931 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 KLHL4Q9C0H6 718 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 DCLRE1BQ9H816 532 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 RGL1Q9NZL6 768 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 PRG3Q9Y2Y8 225 aaPredicted RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 ASNA1O43681 348 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 LCA5LO95447 670 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 SRGNP10124 158 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 RALBP11234 206 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms