RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 USP41Q3LFD5 358 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 VARS2Q5ST30 1063 aaKnown RBP22.84■■□□□ 1.25
SMCO4-201ENST00000298966 EPM2AIP1Q7L775 607 aaPredicted RBP22.84■■□□□ 1.25
SMCO4-201ENST00000298966 GLYCTKQ8IVS8 523 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 GPR65Q8IYL9 337 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 MAML2Q8IZL2 1156 aaPredicted RBP22.84■■□□□ 1.25
SMCO4-201ENST00000298966 ST13P5Q8NFI4 369 aaPredicted RBP22.84■■□□□ 1.25
SMCO4-201ENST00000298966 TMEM143Q96AN5 459 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 HVCN1Q96D96 273 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 MRFAP1L1Q96HT8 127 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 MED15Q96RN5 788 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 TRIM5Q9C035 493 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 THAP9Q9H5L6 903 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 DHX33Q9H6R0 707 aaKnown RBP22.84■■□□□ 1.25
SMCO4-201ENST00000298966 FANCLQ9NW38 375 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 FNIP2Q9P278 1114 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 IPPQ9Y573 584 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 KMT2BQ9UMN6 2715 aaPredicted RBP22.83■■□□□ 1.25
SMCO4-201ENST00000298966 KANSL1LA0AUZ9 987 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 ZMYND10O75800 440 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 KRT37O76014 449 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 TPM3P06753 285 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 SCNN1GP51170 649 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 SMTNP53814 917 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 GPC5P78333 572 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 CACNB1Q02641 598 aaPredicted RBP22.83■■□□□ 1.25
SMCO4-201ENST00000298966 LAMTOR4Q0VGL1 99 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 TTI2Q6NXR4 508 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 LILRA6Q6PI73 481 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 ZNF507Q8TCN5 953 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 SPIRE2Q8WWL2 714 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 KCNN1Q92952 543 aa22.83■■□□□ 1.25
SMCO4-201ENST00000298966 PATJQ8NI35 1801 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 F8W810 466 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 ASAP2O43150 1006 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 AXLP30530 894 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 PRKCQQ04759 706 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 NCBP1Q09161 790 aaKnown RBP22.82■■□□□ 1.24
SMCO4-201ENST00000298966 PPP2R5AQ15172 486 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 EDRF1Q3B7T1 1238 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 CDKAL1Q5VV42 579 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 FUT10Q6P4F1 479 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 DAW1Q8N136 415 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 RNF149Q8NC42 400 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 SCFD1Q8WVM8 642 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 TCP11Q8WWU5 503 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 ATRIPQ8WXE1 791 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 FGF14Q92915 247 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 SECISBP2LQ93073 1101 aaKnown RBP22.82■■□□□ 1.24
SMCO4-201ENST00000298966 CCDC51Q96ER9 411 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 B3GALT6Q96L58 329 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 RPP25Q9BUL9 199 aaKnown RBP22.82■■□□□ 1.24
SMCO4-201ENST00000298966 CDH7Q9ULB5 785 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 MAPK8IP1Q9UQF2 711 aa22.82■■□□□ 1.24
SMCO4-201ENST00000298966 GCNT3O95395 438 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 CDK11BP21127 795 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 EEF1GP26641 437 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 STX17P56962 302 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 SNRPFP62306 86 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 DMP1Q13316 513 aaPredicted RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 UBXN2BQ14CS0 331 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 EMC2Q15006 297 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 MLF2Q15773 248 aaPredicted RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 KNOP1Q1ED39 458 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 NOTUMQ6P988 496 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 PARM1Q6UWI2 310 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 MTSS1LQ765P7 747 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 ZNF720Q7Z2F6 126 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 HACE1Q8IYU2 909 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 GOLGA5Q8TBA6 731 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 IFT74Q96LB3 600 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 ZFP42Q96MM3 310 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 NTPCRQ9BSD7 190 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 EIF2AQ9BY44 585 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 GPR62Q9BZJ7 368 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 RNF39Q9H2S5 420 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 MIOSQ9NXC5 875 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 CGNQ9P2M7 1197 aaKnown RBP22.81■■□□□ 1.24
SMCO4-201ENST00000298966 PCDHGA2Q9Y5H1 932 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 PHLPP2Q6ZVD8 1323 aa22.81■■□□□ 1.24
SMCO4-201ENST00000298966 PDXKO00764 312 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 RPL17P18621 184 aaKnown RBP22.8■■□□□ 1.24
SMCO4-201ENST00000298966 MAGEA9P43362 315 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 CSTF1Q05048 431 aaKnown RBP22.8■■□□□ 1.24
SMCO4-201ENST00000298966 PCBP1Q15365 356 aaKnown RBP eCLIP22.8■■□□□ 1.24
SMCO4-201ENST00000298966 NFIL3Q16649 462 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 HS1BP3Q53T59 392 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 GRASPQ7Z6J2 395 aaPredicted RBP22.8■■□□□ 1.24
SMCO4-201ENST00000298966 CSGALNACT2Q8N6G5 542 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 HPS3Q969F9 1004 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 FIZ1Q96SL8 496 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 DDX23Q9BUQ8 820 aaKnown RBP22.8■■□□□ 1.24
SMCO4-201ENST00000298966 APOL6Q9BWW8 343 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 OSBPL6Q9BZF3 934 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 TMEM206Q9H813 350 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 ADAM28Q9UKQ2 775 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 TRAF3IP3Q9Y228 551 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 GIT1Q9Y2X7 761 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 HES2Q9Y543 173 aa22.8■■□□□ 1.24
SMCO4-201ENST00000298966 CALUO43852 315 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms