RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 NUDCD1Q96RS6 583 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 FAM118BQ9BPY3 351 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 TRIM4Q9C037 500 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 KCNK9Q9NPC2 374 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 DLGAP2Q9P1A6 1054 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 TCEAL9Q9UHQ7 104 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 DIS3Q9Y2L1 958 aaKnown RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 A0A1B0GVG6 124 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 KRT5P13647 590 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 CMPK2Q5EBM0 449 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 CGB2Q6NT52 195 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 C11orf63Q6NUN7 778 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 FAM71AQ8IYT1 594 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 B4GALNT2Q8NHY0 566 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 CKAP2Q8WWK9 683 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 ATG4AQ8WYN0 398 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 DDX23Q9BUQ8 820 aaKnown RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 TXLNGQ9NUQ3 528 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 H0Y3Z8 333 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 GH1P01241 217 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 CYP11B1P15538 503 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 MUTP22033 750 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 PARP6Q2NL67 630 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 RNF43Q68DV7 783 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 ASAP3Q8TDY4 903 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 GORASP1Q9BQQ3 440 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 DEFB129Q9H1M3 183 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 DENND3A2RUS2 1198 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 ACADSP16219 412 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 PTDSS1P48651 473 aaKnown RBP16.53■□□□□ 0.24
UBAP1-201ENST00000297661 GTF2BQ00403 316 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 TSNAXIP1Q2TAA8 658 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 LONP2Q86WA8 852 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 FAM13CQ8NE31 585 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 DNAJC9Q8WXX5 260 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 DCPSQ96C86 337 aaKnown RBP16.53■□□□□ 0.24
UBAP1-201ENST00000297661 TMEM237Q96Q45 408 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 MIF4GDA9UHW6 222 aaKnown RBP16.53■□□□□ 0.24
UBAP1-201ENST00000297661 RARGP13631 454 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 CTNNA2P26232 953 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 CHRNA3P32297 505 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 NPTX2P47972 431 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 VPS41P49754 854 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 POLE2P56282 527 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 USP50Q70EL3 339 aaPredicted RBP16.53■□□□□ 0.24
UBAP1-201ENST00000297661 SLC13A5Q86YT5 568 aaPredicted RBP16.53■□□□□ 0.24
UBAP1-201ENST00000297661 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBAP1-201ENST00000297661 WNK4Q96J92 1243 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 LRMDAQ9H2I8 198 aa16.53■□□□□ 0.24
UBAP1-201ENST00000297661 RFX1P22670 979 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
UBAP1-201ENST00000297661 MOB2Q70IA6 237 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
UBAP1-201ENST00000297661 HELQQ8TDG4 1101 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 PWWP2AQ96N64 755 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 MYLK2Q9H1R3 596 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 TBX20Q9UMR3 447 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 UBIAD1Q9Y5Z9 338 aa16.52■□□□□ 0.24
UBAP1-201ENST00000297661 PFASO15067 1338 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 ACSL3O95573 720 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 COILP38432 576 aaPredicted RBP16.52■□□□□ 0.23
UBAP1-201ENST00000297661 CCDC15Q0P6D6 951 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 MPP2Q14168 576 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 VSIG1Q86XK7 387 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 CD101Q93033 1021 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 HERPUD2Q9BSE4 406 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 ROPN1BQ9BZX4 212 aaPredicted RBP16.52■□□□□ 0.23
UBAP1-201ENST00000297661 ROPN1Q9HAT0 212 aaPredicted RBP16.52■□□□□ 0.23
UBAP1-201ENST00000297661 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 PCDHA3Q9Y5H8 950 aa16.52■□□□□ 0.23
UBAP1-201ENST00000297661 SCN4AP35499 1836 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 TARSP26639 723 aaKnown RBP16.51■□□□□ 0.23
UBAP1-201ENST00000297661 MFAP3P55082 362 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 SLC39A4Q6P5W5 647 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 RNF207Q6ZRF8 634 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 ANO5Q75V66 913 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 ARHGAP22Q7Z5H3 698 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 SULF1Q8IWU6 871 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 AGGF1Q8N302 714 aaeCLIP16.51■□□□□ 0.23
UBAP1-201ENST00000297661 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
UBAP1-201ENST00000297661 TMEM161BQ8NDZ6 487 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 CPA5Q8WXQ8 436 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 POMGNT1Q8WZA1 660 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 SHC3Q92529 594 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 RMDN3Q96TC7 470 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 VCXQ9H320 206 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 PARP2Q9UGN5 583 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 STX2P32856 288 aa16.51■□□□□ 0.23
UBAP1-201ENST00000297661 CUL3Q13618 768 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms