RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 R3HDM2Q9Y2K5 976 aaKnown RBP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 NEU2Q9Y3R4 380 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 ATP2A1O14983 1001 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 CALCAP01258 141 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 SSTR3P32745 418 aaPredicted RBP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 FMO5P49326 533 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 EFTUD2Q15029 972 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 PRR16Q569H4 304 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 C1orf228Q6PIY5 440 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 B3GNT6Q6ZMB0 384 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 PRPF39Q86UA1 669 aaKnown RBP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 ZBTB46Q86UZ6 589 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 DAGLBQ8NCG7 672 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 RBM15BQ8NDT2 890 aaKnown RBP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 PPP1R14CQ8TAE6 165 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 MORC4Q8TE76 937 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 FAM111AQ96PZ2 611 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 MTMR9Q96QG7 549 aa10.75□□□□□ -0.69
CLDN1-201ENST00000295522 MAK16Q9BXY0 300 aaKnown RBP10.75□□□□□ -0.69
CLDN1-201ENST00000295522 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 MROH7Q68CQ1 1323 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L18D6R9N7 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L22D6RA61 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L17D6RBQ6 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L19D6RCP7 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L20D6RJB6 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PI4K2BG5E9Z4 385 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ZNF862O60290 1169 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 HNRNPCL1O60812 293 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PENKP01210 267 aaPredicted RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 KRT5P13647 590 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PEX2P28328 305 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 GCLMP48507 274 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L24Q0WX57 530 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PDK3Q15120 406 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 CCDC92Q53HC0 331 aaPredicted RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 TMEM63BQ5T3F8 832 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PAOXQ6QHF9 649 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 USP17L6PQ6QN14 398 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 CLEC4GQ6UXB4 293 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 SLC30A10Q6XR72 485 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ICA1LQ8NDH6 482 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 EYA3Q99504 573 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 MRPL1Q9BYD6 325 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 LRRC4BQ9NT99 713 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 LZTS1Q9Y250 596 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ZMYM2Q9UBW7 1377 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 NCANO14594 1321 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 TRIM43BA6NCK2 446 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 MED24O75448 989 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 VIL1P09327 827 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 CD58P19256 250 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 RGS2P41220 211 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ARL4CP56559 192 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 GPS1Q13098 491 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 TSHZ1Q6ZSZ6 1077 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ARID3BQ8IVW6 561 aaPredicted RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 GDPD5Q8WTR4 605 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 KAT5Q92993 513 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 TUBB6Q9BUF5 446 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 BTG4Q9NY30 223 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 APEX2Q9UBZ4 518 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 KDM3AQ9Y4C1 1321 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 GGPS1O95749 300 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 CCDC166P0CW27 439 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 RALAP11233 206 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ETS1P14921 441 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 GRIA2P42262 883 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PSMD7P51665 324 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PPIDQ08752 370 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 CETN1Q12798 172 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 DCTN2Q13561 401 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 SFT2D3Q587I9 215 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 FAM182AQ5T1J6 154 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 ULK2Q8IYT8 1036 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 CCDC89Q8N998 374 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 PRPF18Q99633 342 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 RANBP17Q9H2T7 1088 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 LIN28AQ9H9Z2 209 aaKnown RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 GINM1Q9NU53 330 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 IL1RAPL1Q9NZN1 696 aa10.74□□□□□ -0.69
CLDN1-201ENST00000295522 HEMK1Q9Y5R4 338 aaPredicted RBP10.74□□□□□ -0.69
CLDN1-201ENST00000295522 LRP6O75581 1613 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 I3L4J1 428 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 LPXNO60711 386 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 KLRK1P26718 216 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 CA8P35219 290 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 JAM2P57087 298 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 ZNF200P98182 395 aaPredicted RBP10.73□□□□□ -0.69
CLDN1-201ENST00000295522 SLC25A3Q00325 362 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 C16orf72Q14CZ0 275 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 HSP90AA5PQ58FG0 334 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms