RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TASP1Q9H6P5 420 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 ATP6V1G2O95670 118 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 CCDC85BQ15834 202 aaPredicted RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 BTNL9Q6UXG8 535 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 UBA3Q8TBC4 463 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 SPIRE2Q8WWL2 714 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 MAP4P27816 1152 aaKnown RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 NCOA4Q13772 614 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 EGFL8Q99944 293 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 COG4Q9H9E3 785 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 JMJD4Q9H9V9 463 aa16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 METTL5Q9NRN9 209 aaKnown RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 PAIP2BQ9ULR5 123 aaKnown RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
SHROOM4-201ENST00000289292 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 HNRNPCL1O60812 293 aaKnown RBP16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 VHLP40337 213 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 AFG1LQ8WV93 481 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 SPATA33Q96N06 139 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 DDX20Q9UHI6 824 aaKnown RBP16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 MAP3K6O95382 1288 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 KCTD19Q17RG1 926 aaPredicted RBP16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 SUPT20HL1Q3ZLR7 823 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 CIAPIN1Q6FI81 312 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 SP110Q9HB58 689 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 HEY2Q9UBP5 337 aa16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.08■□□□□ 0.17
SHROOM4-201ENST00000289292 KLRK1P26718 216 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 MRPS35P82673 323 aaKnown RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 MRPS15P82914 257 aaKnown RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 SPP2Q13103 211 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 TWF2Q6IBS0 349 aaKnown RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 IFNEQ86WN2 208 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 DAGLAQ9Y4D2 1042 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 ESRRBO95718 433 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 KCNA2P16389 499 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 GTF2H1P32780 548 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 PLOD1Q02809 727 aaPredicted RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 ITIH4Q14624 930 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 CRYMQ14894 314 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 EP400NLQ6ZTU2 488 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 EML4Q9HC35 981 aaKnown RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 PCDHA10Q9Y5I2 948 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 PDGFRAP16234 1089 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 PAX7P23759 505 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 NT5C2P49902 561 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 HDAC4P56524 1084 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 GEMIN4P57678 1058 aaKnown RBP16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 MAPK7Q13164 816 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 ORC1Q13415 861 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 IL31Q6EBC2 164 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 TAS2R42Q7RTR8 314 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 SPATA18Q8TC71 538 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 NAGPAQ9UK23 515 aa16.08■□□□□ 0.16
SHROOM4-201ENST00000289292 UBOX5O94941 541 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 ACTR2P61160 394 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 SLC13A5Q86YT5 568 aaPredicted RBP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 ULK4Q96C45 1275 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 ARHGAP20Q9P2F6 1191 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 PRKCBP05771 671 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 EDRF1Q3B7T1 1238 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 ELOA2Q8IYF1 753 aaPredicted RBP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 PABPC3Q9H361 631 aaKnown RBP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 CST8O60676 142 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 SYF2O95926 243 aaKnown RBP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 ZSWIM1Q9BR11 485 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 ANGPT2O15123 496 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 HLA-DRAP01903 254 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 CSF1RP07333 972 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 TRPC1P48995 793 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 DSG1Q02413 1049 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 SYN2Q92777 582 aaPredicted RBP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 SERPINB12Q96P63 405 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 USP10Q14694 798 aaKnown RBP16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 CATSPER1Q8NEC5 780 aa16.07■□□□□ 0.16
SHROOM4-201ENST00000289292 CCDC159P0C7I6 412 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 CDC25CP30307 473 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 AVPR1AP37288 418 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 SBK1Q52WX2 424 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 ITPRIPL1Q6GPH6 555 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 C16orf86Q6ZW13 317 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 TTC30BQ8N4P2 665 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 FAM167AQ96KS9 214 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 JPH1Q9HDC5 661 aaPredicted RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 FAM49BQ9NUQ9 324 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 STAP1Q9ULZ2 295 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 ARHGEF9O43307 516 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms