RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 VPS11Q9H270 941 aa18.39■□□□□ 0.54
PCDHA13-201ENST00000289272 ZNF212Q9UDV6 495 aa18.39■□□□□ 0.54
PCDHA13-201ENST00000289272 A0A1B0GW55 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 SNRPAP09012 282 aaKnown RBP18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4L2P0CJ85 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4L3P0CJ86 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4L4P0CJ87 422 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4L5P0CJ88 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4L6P0CJ89 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4L7P0CJ90 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 QARSP47897 775 aaKnown RBP18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 HERVK_113P62684 666 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 ADCK1Q86TW2 530 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 RBM46Q8TBY0 533 aaKnown RBP18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 ZWILCHQ9H900 591 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 NSMCE4AQ9NXX6 385 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 DUX4Q9UBX2 424 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 GGT7Q9UJ14 662 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 CD58P19256 250 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 KLRC1P26715 233 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 COPAP53621 1224 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 CACNA2D1P54289 1103 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 MEI1Q5TIA1 1274 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 ITPRIPL1Q6GPH6 555 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 LVRNQ6Q4G3 990 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 LPAR1Q92633 364 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 HOXD10P28358 340 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 PPARGP37231 505 aaPredicted RBP18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 SLC34A1Q06495 639 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 KYAT1Q16773 422 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 P3H1Q32P28 736 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 MCUQ8NE86 351 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 ACAP3Q96P50 834 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 KLHL4Q9C0H6 718 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 PXDNQ92626 1479 aa18.39■□□□□ 0.53
PCDHA13-201ENST00000289272 ZBTB33Q86T24 672 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 TTC8Q8TAM2 541 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 LRRC4Q9HBW1 653 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 WDR35Q9P2L0 1181 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 SLC24A2Q9UI40 661 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 EIF4E1BA6NMX2 242 aaKnown RBP18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 F8W8V4 182 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 TM9SF1O15321 606 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 AASDHQ4L235 1098 aaPredicted RBP18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 HORMAD1Q86X24 394 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 LXNQ9BS40 222 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 SLC16A4O15374 487 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 SERPINB8P50452 374 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 PCYOX1LQ8NBM8 494 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 CNPY3Q9BT09 278 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 DDX28Q9NUL7 540 aaKnown RBP18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 G3BP2Q9UN86 482 aaKnown RBP18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 NWD1Q149M9 1564 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 ASB14A6NK59 587 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 PAX7P23759 505 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 S100A5P33763 92 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 CASP7P55210 303 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 ELF3P78545 371 aaPredicted RBP18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 EPHA7Q15375 998 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 KBTBD12Q3ZCT8 623 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 GPR141Q7Z602 305 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 DAGLBQ8NCG7 672 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 MAGEB5Q9BZ81 275 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 GRID1Q9ULK0 1009 aa18.38■□□□□ 0.53
PCDHA13-201ENST00000289272 WFS1O76024 890 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 UBOX5O94941 541 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 ABL1P00519 1130 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 TYK2P29597 1187 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 MMP14P50281 582 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 ITPK1Q13572 414 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 FLOT2Q14254 428 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 SCUBE1Q8IWY4 988 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 STK32AQ8WU08 396 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 RNF25Q96BH1 459 aaPredicted RBP18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 OLFML3Q9NRN5 406 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 BFARQ9NZS9 450 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 F8VZ95 297 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 TRIM16LQ309B1 348 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 LRRC8EQ6NSJ5 796 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 CASP10Q92851 521 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 E2F7Q96AV8 911 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 RNF181Q9P0P0 153 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 ITKQ08881 620 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 MAPK6Q16659 721 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 VPS33BQ9H267 617 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 SPON1Q9HCB6 807 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 GTSE1Q9NYZ3 720 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 SLC9A2Q9UBY0 812 aa18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 TTC7AQ9ULT0 858 aaPredicted RBP18.37■□□□□ 0.53
PCDHA13-201ENST00000289272 C19orf81C9J6K1 198 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 KLHDC7AQ5VTJ3 777 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 PCNX4Q63HM2 1172 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
PCDHA13-201ENST00000289272 HSPH1Q92598 858 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms