RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ITGB3P05106 788 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 PAX3P23760 479 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 TAF6P49848 677 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 YWHAHQ04917 246 aaPredicted RBP27.16■■□□□ 1.94
PDF-201ENST00000288022 LIN9Q5TKA1 542 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 ANKRD36BP1Q96IX9 119 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 FAM84AQ96KN4 292 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 SENP8Q96LD8 212 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 ZNF560Q96MR9 790 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 MTMR12Q9C0I1 747 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 KCTD10Q9H3F6 313 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 RMND1Q9NWS8 449 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 FBXL5Q9UKA1 691 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 FBXW11Q9UKB1 542 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 A0A0C4DFX4 3053 aa27.16■■□□□ 1.94
PDF-201ENST00000288022 CCDC195A0A1B0GUA6 201 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 PDXKO00764 312 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 SPTLC1O15269 473 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 RFPL2O75678 378 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 TNNC2P02585 160 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 KRT19P08727 400 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 ODC1P11926 461 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 POLR2BP30876 1174 aaKnown RBP27.15■■□□□ 1.94
PDF-201ENST00000288022 GPR149Q86SP6 731 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 C1orf127Q8N9H9 656 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 RPGRIP1Q96KN7 1286 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 FNBP1Q96RU3 617 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 CD320Q9NPF0 282 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 AGAP1Q9UPQ3 857 aa27.15■■□□□ 1.94
PDF-201ENST00000288022 ARHGEF37A1IGU5 675 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 DLATP10515 647 aaKnown RBP27.14■■□□□ 1.94
PDF-201ENST00000288022 CYP24A1Q07973 514 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 MRPL58Q14197 206 aaKnown RBP27.14■■□□□ 1.94
PDF-201ENST00000288022 SV2CQ496J9 727 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 SLC8B1Q6J4K2 584 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 CSGALNACT2Q8N6G5 542 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 CMASQ8NFW8 434 aaPredicted RBP27.14■■□□□ 1.94
PDF-201ENST00000288022 FEZF2Q8TBJ5 459 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 ERCC4Q92889 916 aaPredicted RBP27.14■■□□□ 1.94
PDF-201ENST00000288022 SMARCE1Q969G3 411 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 CCDC127Q96BQ5 260 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 POMKQ9H5K3 350 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 INTS13Q9NVM9 706 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 ITGA11Q9UKX5 1188 aa27.14■■□□□ 1.94
PDF-201ENST00000288022 R3HCC1Q9Y3T6 440 aaKnown RBP27.14■■□□□ 1.94
PDF-201ENST00000288022 CALUO43852 315 aaPredicted RBP27.13■■□□□ 1.93
PDF-201ENST00000288022 TNNI1P19237 187 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 SP100P23497 879 aaPredicted RBP27.13■■□□□ 1.93
PDF-201ENST00000288022 PNPLA4P41247 253 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 ROR1Q01973 937 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 PSMD6Q15008 389 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 C15orf39Q6ZRI6 1047 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 WDR49Q8IV35 697 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 SMG7Q92540 1137 aaKnown RBP27.13■■□□□ 1.93
PDF-201ENST00000288022 PIDD1Q9HB75 910 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 TSHZ2Q9NRE2 1034 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 ZDHHC7Q9NXF8 308 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 MTCL1Q9Y4B5 1905 aaKnown RBP27.13■■□□□ 1.93
PDF-201ENST00000288022 PTPRJQ12913 1337 aa27.13■■□□□ 1.93
PDF-201ENST00000288022 C19orf67A6NJJ6 358 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 CYB561D2O14569 222 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 TBC1D4O60343 1298 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 ZMYND10O75800 440 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 NR3C1P04150 777 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 C8AP07357 584 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 TYMPP19971 482 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 DUOXA2Q1HG44 320 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 PPM1LQ5SGD2 360 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 OVOS1Q6IE37 1185 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 SMYD4Q8IYR2 804 aaPredicted RBP27.12■■□□□ 1.93
PDF-201ENST00000288022 GUF1Q8N442 669 aaKnown RBP27.12■■□□□ 1.93
PDF-201ENST00000288022 OR5B17Q8NGF7 314 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 GSDMAQ96QA5 445 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 PCDHA5Q9Y5H7 936 aa27.12■■□□□ 1.93
PDF-201ENST00000288022 KPNA7A9QM74 516 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 PRPF40AO75400 957 aaKnown RBP27.11■■□□□ 1.93
PDF-201ENST00000288022 OAZ2O95190 189 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 CPB1P15086 417 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 RBP5P82980 135 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 BFSP1Q12934 665 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 METTL23Q86XA0 190 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 ZNF461Q8TAF7 563 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 SLC7A14Q8TBB6 771 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 CGRRF1Q99675 332 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 DSEQ9UL01 958 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 SCN1AP35498 2009 aa27.11■■□□□ 1.93
PDF-201ENST00000288022 VCANP13611 3396 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 WDR27A2RRH5 827 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 ELF1P32519 619 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 UBE2HP62256 183 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 CEP135Q66GS9 1140 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 CYP26C1Q6V0L0 522 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 CCDC149Q6ZUS6 474 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 SLC9A9Q8IVB4 645 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 LRRC52Q8N7C0 313 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 MFSD14AQ96MC6 490 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 OXCT2Q9BYC2 517 aaPredicted RBP27.1■■□□□ 1.93
PDF-201ENST00000288022 PRKD2Q9BZL6 878 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 DMAC2Q9NW81 257 aa27.1■■□□□ 1.93
PDF-201ENST00000288022 TRAF3IP3Q9Y228 551 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms