RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 PACSIN3Q9UKS6 424 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 PRR12Q9ULL5 1215 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 ARP10275 920 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 CHI3L2Q15782 390 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 MCF2L2Q86YR7 1114 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 NDUFAF2Q8N183 169 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 EXT2Q93063 718 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 TBC1D10AQ9BXI6 508 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 GANQ9H2C0 597 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 NINJ2Q9NZG7 142 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 UBE4BO95155 1302 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 ATP13A4Q4VNC1 1196 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 LDHDQ86WU2 507 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 CCT6BQ92526 530 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 AGAP3Q96P47 875 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 SUDS3Q9H7L9 328 aaPredicted RBP16.54■□□□□ 0.24
USP43-201ENST00000285199 DCLRE1BQ9H816 532 aa16.54■□□□□ 0.24
USP43-201ENST00000285199 ESYT2A0FGR8 921 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 SNUPNO95149 360 aaKnown RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 FNTAP49354 379 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 NFX1Q12986 1120 aaKnown RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 BMPR2Q13873 1038 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 KPNB1Q14974 876 aaKnown RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 IYDQ6PHW0 289 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 ENO3P13929 434 aaPredicted RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 BCAR1P56945 870 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 CNGA3Q16281 694 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 LRRC6Q86X45 466 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 RYBPQ8N488 228 aaPredicted RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 SCG3Q8WXD2 468 aaKnown RBP16.53■□□□□ 0.24
USP43-201ENST00000285199 MTMR9Q96QG7 549 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 KCNN4O15554 427 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 ETS2P15036 469 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 TYK2P29597 1187 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 ALDH1B1P30837 517 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 PHEXP78562 749 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 LAMB3Q13751 1172 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 CDC42EP5Q6NZY7 148 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 RMDN2Q96LZ7 410 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 IP6K2Q9UHH9 426 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 C2CD2Q9Y426 696 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
USP43-201ENST00000285199 XPO1O14980 1071 aaKnown RBP16.52■□□□□ 0.24
USP43-201ENST00000285199 DDR1Q08345 913 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 RRP1BQ14684 758 aaKnown RBP16.52■□□□□ 0.24
USP43-201ENST00000285199 DNAI2Q9GZS0 605 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 WWP1Q9H0M0 922 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 TRPV6Q9H1D0 765 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 BCAP29Q9UHQ4 241 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 AGO2Q9UKV8 859 aaKnown RBP16.52■□□□□ 0.24
USP43-201ENST00000285199 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 CALB2P22676 271 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 TFDP1Q14186 410 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 CPNE8Q86YQ8 564 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 FITM2Q8N6M3 262 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 RBBP8NLQ8NC74 664 aaPredicted RBP16.52■□□□□ 0.24
USP43-201ENST00000285199 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 ZC3H7BQ9UGR2 993 aaKnown RBP16.52■□□□□ 0.24
USP43-201ENST00000285199 TLK1Q9UKI8 766 aa16.52■□□□□ 0.24
USP43-201ENST00000285199 GMNNO75496 209 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 KRT3P12035 628 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 RPA3P35244 121 aaPredicted RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 HABP4Q5JVS0 413 aaKnown RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 ZNF720Q7Z2F6 126 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 RNF148Q8N7C7 305 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 SPATA18Q8TC71 538 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 CNKSR1Q969H4 720 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 PARVAQ9NVD7 372 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 SENP1Q9P0U3 644 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 PECAM1P16284 738 aaPredicted RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 HOXA7P31268 230 aaPredicted RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 PTDSS1P48651 473 aaKnown RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 RGS7P49802 495 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 STX3Q13277 289 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 ZCWPW2Q504Y3 356 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 DUPD1Q68J44 220 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 NOP9Q86U38 636 aaKnown RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 CDAN1Q8IWY9 1227 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 FBXO36Q8NEA4 188 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 TCP10LQ8TDR4 215 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 STK32AQ8WU08 396 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 HDAC11Q96DB2 347 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 PURBQ96QR8 312 aaKnown RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 KLC2Q9H0B6 622 aa16.52■□□□□ 0.23
USP43-201ENST00000285199 PIH1D1Q9NWS0 290 aaKnown RBP16.52■□□□□ 0.23
USP43-201ENST00000285199 MEI4A8MW99 385 aa16.51■□□□□ 0.23
USP43-201ENST00000285199 KRT36O76013 467 aa16.51■□□□□ 0.23
USP43-201ENST00000285199 HLA-DRAP01903 254 aa16.51■□□□□ 0.23
USP43-201ENST00000285199 ITKQ08881 620 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms