RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 TPCN2Q8NHX9 752 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 TFAP2BQ92481 460 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 KCNN1Q92952 543 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 OSBPL9Q96SU4 736 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 GTF2IRD1Q9UHL9 959 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 ANK1P16157 1881 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 B4GALT4O60513 344 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 CHRNA1P02708 482 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 CD19P15391 556 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 RFX1P22670 979 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 ASPAP45381 313 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 MCCD1P59942 119 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-201ENST00000282841 PAPD7Q5XG87 772 aaKnown RBP11.74□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF662Q6ZS27 426 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 FAM228AQ86W67 206 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-201ENST00000282841 AGO3Q9H9G7 860 aaKnown RBP11.74□□□□□ -0.53
GGPS1-201ENST00000282841 DPP3Q9NY33 737 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 SNX12Q9UMY4 172 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 SCN1AP35498 2009 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 KCNK3O14649 394 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 INHAP05111 366 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 GHRP10912 638 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 MESDQ14696 234 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 PTGISQ16647 500 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 SLC27A1Q6PCB7 646 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF653Q96CK0 615 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 C11orf70Q9BRQ4 267 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 KATNAL1Q9BW62 490 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 TRPV6Q9H1D0 765 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 TJP2Q9UDY2 1190 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CDH23Q9H251 3354 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CITO14578 2027 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 SPDYE4A6NLX3 237 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 MARCKSL1P49006 195 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF211Q13398 564 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-201ENST00000282841 SGSM1Q2NKQ1 1148 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 NOTUMQ6P988 496 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CREG2Q8IUH2 290 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 GPATCH11Q8N954 259 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 HPDLQ96IR7 371 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CELF4Q9BZC1 486 aaKnown RBP11.73□□□□□ -0.53
GGPS1-201ENST00000282841 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 Q9Y3F1 56 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CAPN2P17655 700 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 SCP2P22307 547 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 RRM1P23921 792 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 FBXO38Q6PIJ6 1188 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 LRRC57Q8N9N7 239 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CXorf38Q8TB03 319 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF606Q8WXB4 792 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 TRIM17Q9Y577 477 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
GGPS1-201ENST00000282841 CD52P31358 61 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-201ENST00000282841 CCDC142Q17RM4 750 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF667Q5HYK9 610 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 UBXN11Q5T124 520 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 MMS22LQ6ZRQ5 1243 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 PEX26Q7Z412 305 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 RNF10Q8N5U6 811 aaKnown RBP11.72□□□□□ -0.53
GGPS1-201ENST00000282841 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 PCDHB2Q9Y5E7 798 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 CTAGE15A4D2H0 777 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 ANKRD62A6NC57 917 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.53
GGPS1-201ENST00000282841 RTN2O75298 545 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 HMGCRP04035 888 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 CTAGE8P0CG41 777 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 MRPS6P82932 125 aaKnown RBP11.72□□□□□ -0.53
GGPS1-201ENST00000282841 SOX4Q06945 474 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF618Q5T7W0 954 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 MEI1Q5TIA1 1274 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 CTAGE6Q86UF2 777 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 CTAGE4Q8IX94 777 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 ISCUQ9H1K1 167 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 IPPQ9Y573 584 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
GGPS1-201ENST00000282841 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.53
GGPS1-201ENST00000282841 RPS6KA5O75582 802 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.53
GGPS1-201ENST00000282841 IL18RAPO95256 599 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 TMEM253P0C7T8 217 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 GNAT1P11488 350 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 CRYBB1P53674 252 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-201ENST00000282841 SLC7A5Q01650 507 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 ITGA7Q13683 1181 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 CYP4A22Q5TCH4 519 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
GGPS1-201ENST00000282841 C1orf131Q8NDD1 294 aaKnown RBP11.71□□□□□ -0.53
GGPS1-201ENST00000282841 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 RFFLQ8WZ73 363 aa11.71□□□□□ -0.53
GGPS1-201ENST00000282841 PNKPQ96T60 521 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms