RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 GCNT1Q02742 428 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 NAB2Q15742 525 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 TCTN1Q2MV58 587 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 DPH6Q7L8W6 267 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 GSTCDQ8NEC7 633 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 ANKRD36BP1Q96IX9 119 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 MYO6Q9UM54 1294 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 PCDHB2Q9Y5E7 798 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 SMIM28A0A1B0GU29 152 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 PTGESO14684 152 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 HSPA6P17066 643 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 FBXO47Q5MNV8 452 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 SECISBP2LQ93073 1101 aaKnown RBP12.55□□□□□ -0.4
SSRP1-201ENST00000278412 CYFIP2Q96F07 1278 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 GAD1Q99259 594 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 SCN5AQ14524 2016 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 PALMO75781 387 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 FTLP02792 175 aaPredicted RBP12.54□□□□□ -0.4
SSRP1-201ENST00000278412 CKBP12277 381 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 CCL5P13501 91 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 ALKAL1Q6UXT8 129 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 UBR7Q8N806 425 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 CCP110O43303 1012 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 KRT86O43790 486 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 PQBP1O60828 265 aaKnown RBP12.54□□□□□ -0.4
SSRP1-201ENST00000278412 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
SSRP1-201ENST00000278412 PAN2Q504Q3 1202 aaKnown RBP12.54□□□□□ -0.4
SSRP1-201ENST00000278412 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
SSRP1-201ENST00000278412 GRID2IPA4D2P6 1211 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 M0QZ92 97 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 IL18RAPO95256 599 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
SSRP1-201ENST00000278412 BMS1Q14692 1282 aaKnown RBP12.53□□□□□ -0.4
SSRP1-201ENST00000278412 GPNMBQ14956 572 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 RTN4RL1Q86UN2 441 aaPredicted RBP12.53□□□□□ -0.4
SSRP1-201ENST00000278412 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 MMS19Q96T76 1030 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 CARD6Q9BX69 1037 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 PJA2O43164 708 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 B4GALT3O60512 393 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 NOP2P46087 812 aaKnown RBP12.53□□□□□ -0.4
SSRP1-201ENST00000278412 ZBTB6Q15916 424 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 AGMOQ6ZNB7 445 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 NME8Q8N427 588 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 C12orf29Q8N999 325 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 MRPL45Q9BRJ2 306 aaKnown RBP12.53□□□□□ -0.4
SSRP1-201ENST00000278412 ELOVL4Q9GZR5 314 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 PAK6Q9NQU5 681 aaPredicted RBP12.53□□□□□ -0.4
SSRP1-201ENST00000278412 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
SSRP1-201ENST00000278412 GOLGA6L9A6NEM1 432 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 I3L4J1 428 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 PIK3R2O00459 728 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 THAP12O43422 761 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 GNA15P30679 374 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 PDE6CP51160 858 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 MRPS25P82663 173 aaKnown RBP12.52□□□□□ -0.4
SSRP1-201ENST00000278412 LINC01599Q8WXQ3 324 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 SCLYQ96I15 445 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 ADAM2Q99965 735 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 HINFPQ9BQA5 517 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 ASB7Q9H672 318 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 ERVK-5Q9HDB9 667 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 HCSTQ9UBK5 93 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 SNX9Q9Y5X1 595 aa12.52□□□□□ -0.4
SSRP1-201ENST00000278412 BZW2Q9Y6E2 419 aaKnown RBP12.52□□□□□ -0.4
SSRP1-201ENST00000278412 POMCP01189 267 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 H2AFZP0C0S5 128 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 RFX1P22670 979 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 SCNN1GP51170 649 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.41
SSRP1-201ENST00000278412 AMPD2Q01433 879 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 CDR2Q01850 454 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
SSRP1-201ENST00000278412 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 SLC35G2Q8TBE7 412 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 HASPINQ8TF76 798 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 IMPG2Q9BZV3 1241 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 PDCD11Q14690 1871 aaKnown RBP12.52□□□□□ -0.41
SSRP1-201ENST00000278412 TMEM110-MUSTN1A8MSY1 372 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
SSRP1-201ENST00000278412 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.41
SSRP1-201ENST00000278412 GNRH1P01148 92 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 MYRIPQ8NFW9 859 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.41
SSRP1-201ENST00000278412 CYTH4Q9UIA0 394 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms