RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TRIM51Q9BSJ1 452 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 SMARCAL1Q9NZC9 954 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 NNMTP40261 264 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 SMAD1Q15797 465 aaKnown RBP16.22■□□□□ 0.19
TIMP3-201ENST00000266085 CDKAL1Q5VV42 579 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 A0A087WZ62 844 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 EML1O00423 815 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 KCNN4O15554 427 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 STRNO43815 780 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 B3GAT3O94766 335 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 APRTP07741 180 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 INSRRP14616 1297 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 ITIH2P19823 946 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 FGFR4P22455 802 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 COPS2P61201 443 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 CCNI2Q6ZMN8 369 aaPredicted RBP16.22■□□□□ 0.19
TIMP3-201ENST00000266085 ATP8B4Q8TF62 1192 aa16.22■□□□□ 0.19
TIMP3-201ENST00000266085 FDXACB1Q9BRP7 624 aaPredicted RBP16.22■□□□□ 0.19
TIMP3-201ENST00000266085 TMEM150BA6NC51 233 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 TAS1R2Q8TE23 839 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 EFHD1Q9BUP0 239 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 A0A087X0B3 334 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 TYK2P29597 1187 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
TIMP3-201ENST00000266085 COL9A3Q14050 684 aaPredicted RBP16.21■□□□□ 0.19
TIMP3-201ENST00000266085 RBM15Q96T37 977 aaKnown RBP eCLIP16.21■□□□□ 0.19
TIMP3-201ENST00000266085 CARD9Q9H257 536 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 DPP3Q9NY33 737 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 DBR1Q9UK59 544 aaKnown RBP16.21■□□□□ 0.19
TIMP3-201ENST00000266085 ERVK-24P63145 666 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 DCAF4L1Q3SXM0 396 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 C1orf131Q8NDD1 294 aaKnown RBP16.21■□□□□ 0.19
TIMP3-201ENST00000266085 RAB6BQ9NRW1 208 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 SENP1Q9P0U3 644 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 ZFATQ9P243 1243 aa16.21■□□□□ 0.19
TIMP3-201ENST00000266085 ALDH5A1P51649 535 aaPredicted RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 ZNF235Q14590 738 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 BEND6Q5SZJ8 279 aaPredicted RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 TTC8Q8TAM2 541 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SLC5A5Q92911 643 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 CYTH2Q99418 400 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 FAM96AQ9H5X1 160 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 APOBEC2Q9Y235 224 aaKnown RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 ACADSBP45954 432 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SATB1Q01826 763 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 BYSLQ13895 437 aaKnown RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 FEZF2Q8TBJ5 459 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 GBP5Q96PP8 586 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SYNPO2Q9UMS6 1093 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 DFFAO00273 331 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 OPHN1O60890 802 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SESN2P58004 480 aaPredicted RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 AMHR2Q16671 573 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 P3H1Q32P28 736 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 DCAF6Q58WW2 860 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SV2AQ7L0J3 742 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 REXO1L1PQ8IX06 675 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SETD4Q9NVD3 440 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 MRC1P22897 1456 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 CFAP69A5D8W1 941 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 ZBTB39O15060 712 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 CFLARO15519 480 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 CDH16O75309 829 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 ZNF286BP0CG31 522 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 PNPLA4P41247 253 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 NIPA1Q7RTP0 329 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 USP38Q8NB14 1042 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 ZNF512Q96ME7 567 aaPredicted RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 SLC13A1Q9BZW2 595 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 THAP2Q9H0W7 228 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 VIPAS39Q9H9C1 493 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 ABCF3Q9NUQ8 709 aa16.2■□□□□ 0.18
TIMP3-201ENST00000266085 MORC2Q9Y6X9 1032 aaPredicted RBP16.2■□□□□ 0.18
TIMP3-201ENST00000266085 IRF6O14896 467 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 HMBSP08397 361 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 ADORA2AP29274 412 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 DEUP1Q05D60 604 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 POU5F1BQ06416 359 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 DRP2Q13474 957 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 USP50Q70EL3 339 aaPredicted RBP16.19■□□□□ 0.18
TIMP3-201ENST00000266085 JAMLQ86YT9 394 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 NOA1Q8NC60 698 aaKnown RBP16.19■□□□□ 0.18
TIMP3-201ENST00000266085 RANBP17Q9H2T7 1088 aaKnown RBP16.19■□□□□ 0.18
TIMP3-201ENST00000266085 ATP9BO43861 1147 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 RBP3P10745 1247 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 MAP2K2P36507 400 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 HNRNPH2P55795 449 aaKnown RBP16.19■□□□□ 0.18
TIMP3-201ENST00000266085 ACCSLQ4AC99 568 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 C2CD6Q53TS8 623 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 CYP4A22Q5TCH4 519 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 CCNYL1Q8N7R7 359 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 C9orf72Q96LT7 481 aa16.19■□□□□ 0.18
TIMP3-201ENST00000266085 AGAP3Q96P47 875 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms