RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LRRC37BQ96QE4 947 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 MRIQ9BWK5 157 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 TRABDQ9H4I3 376 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ZSCAN5DPP0CG00 497 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 MARSP56192 900 aaKnown RBP20.95■□□□□ 0.94
CSPG5-201ENST00000264723 FAM182AQ5T1J6 154 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 FBXO16Q8IX29 292 aaPredicted RBP20.95■□□□□ 0.94
CSPG5-201ENST00000264723 EXOC8Q8IYI6 725 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 MREGQ8N565 214 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 PRPF31Q8WWY3 499 aaKnown RBP20.95■□□□□ 0.94
CSPG5-201ENST00000264723 KIF12Q96FN5 646 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ZBTB45Q96K62 511 aaPredicted RBP20.95■□□□□ 0.94
CSPG5-201ENST00000264723 SIX2Q9NPC8 291 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ABCF3Q9NUQ8 709 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 AGAP1Q9UPQ3 857 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 PCDHB2Q9Y5E7 798 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 SLC26A4O43511 780 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 TBXAS1P24557 533 aaPredicted RBP20.95■□□□□ 0.94
CSPG5-201ENST00000264723 MAGEA4P43358 317 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 MAML1Q92585 1016 aa20.95■□□□□ 0.94
CSPG5-201ENST00000264723 ADM5C9JUS6 153 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 TNFRSF8P28908 595 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 RGS7P49802 495 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 OVGP1Q12889 678 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 EFCAB12Q6NXP0 572 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 HACE1Q8IYU2 909 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 A1CFQ9NQ94 594 aaKnown RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 BRD2P25440 801 aaKnown RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 CDC25CP30307 473 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 TGFB2P61812 414 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 PPP2R5CQ13362 524 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 FAM102AQ5T9C2 384 aaPredicted RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 RAB3IPQ96QF0 476 aaPredicted RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 RANBP17Q9H2T7 1088 aaKnown RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 TAF1P21675 1872 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 FRMPD4Q14CM0 1322 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 I3L4J1 428 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 CDH16O75309 829 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 PDHA1P08559 390 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 TRMT10CQ7L0Y3 403 aaKnown RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 PDIK1LQ8N165 341 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 PPFIBP2Q8ND30 876 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 SLC38A10Q9HBR0 1119 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 LRRC4Q9HBW1 653 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 NOD2Q9HC29 1040 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 ZNF142P52746 1687 aaPredicted RBP20.94■□□□□ 0.94
CSPG5-201ENST00000264723 IGKV6D-41A0A0C4DH26 115 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 CFAP69A5D8W1 941 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 LY6KQ17RY6 165 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 NCAPGQ9BPX3 1015 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 TIPINQ9BVW5 301 aa20.94■□□□□ 0.94
CSPG5-201ENST00000264723 GTF2H1P32780 548 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 EFNA5P52803 228 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 ENOSF1Q7L5Y1 443 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 TRAPPC12Q8WVT3 735 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 CXorf56Q9H5V9 222 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 CCDC195A0A1B0GUA6 201 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 RASSF2P50749 326 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 DUPD1Q68J44 220 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 C4orf19Q8IY42 314 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 PARD3BQ8TEW8 1205 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 PIK3R5Q8WYR1 880 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 SEMA4DQ92854 862 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 LENG9Q96B70 501 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 SLC13A1Q9BZW2 595 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 NPHS2Q9NP85 383 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 ARL2BPQ9Y2Y0 163 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 TRPM3Q9HCF6 1732 aaPredicted RBP20.93■□□□□ 0.94
CSPG5-201ENST00000264723 ARHGAP42A6NI28 874 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 CREB1P16220 341 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 UGCGQ16739 394 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 FASTKD5Q7L8L6 764 aaKnown RBP20.93■□□□□ 0.94
CSPG5-201ENST00000264723 CD302Q8IX05 232 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 CCDC33Q8N5R6 958 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 C2orf69Q8N8R5 385 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 C1orf131Q8NDD1 294 aaKnown RBP20.93■□□□□ 0.94
CSPG5-201ENST00000264723 CFAP61Q8NHU2 1237 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 NACA2Q9H009 215 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 C2orf40Q9H1Z8 148 aa20.93■□□□□ 0.94
CSPG5-201ENST00000264723 MAPK13O15264 365 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 CHKAP35790 457 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 TPX2Q9ULW0 747 aaKnown RBP20.92■□□□□ 0.94
CSPG5-201ENST00000264723 INPP5FQ9Y2H2 1132 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 SNX9Q9Y5X1 595 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 MOB2Q70IA6 237 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 PPM1NQ8N819 430 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 SAE1Q9UBE0 346 aaPredicted RBP20.92■□□□□ 0.94
CSPG5-201ENST00000264723 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 PTPRAP18433 802 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 C1orf228Q6PIY5 440 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 ANKRD13AQ8IZ07 590 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 PPP1R13LQ8WUF5 828 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 TMEM121Q9BTD3 319 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 MTMR12Q9C0I1 747 aa20.92■□□□□ 0.94
CSPG5-201ENST00000264723 NOP53Q9NZM5 478 aaKnown RBP20.92■□□□□ 0.94
CSPG5-201ENST00000264723 DDX3YO15523 660 aaKnown RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 SUPT20HL2P0C7V6 817 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 SPIRE1Q08AE8 756 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 MDH1BQ5I0G3 518 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 TTC27Q6P3X3 843 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms