RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 ASRGL1Q7L266 308 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 PDIK1LQ8N165 341 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 KCTD10Q9H3F6 313 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 Q9H521 79 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 TAS2R1Q9NYW7 299 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 SORBS3O60504 671 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 ANPEPP15144 967 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 GNAZP19086 355 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 SLC25A3Q00325 362 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 CAV1Q03135 178 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 SGSM1Q2NKQ1 1148 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 MFSD5Q6N075 450 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 RBM44Q6ZP01 1051 aaKnown RBP17.15■□□□□ 0.34
GPC1-201ENST00000264039 NUDCD3Q8IVD9 361 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 APLFQ8IW19 511 aaPredicted RBP17.15■□□□□ 0.34
GPC1-201ENST00000264039 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 GSTCDQ8NEC7 633 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 SENP7Q9BQF6 1050 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 FAM192AQ9GZU8 254 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 AK5Q9Y6K8 562 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 CCNB1P14635 433 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 VAMP7P51809 220 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 SLC45A4Q5BKX6 768 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 KRT80Q6KB66 452 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 RNF148Q8N7C7 305 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 PRPF18Q99633 342 aaKnown RBP17.15■□□□□ 0.34
GPC1-201ENST00000264039 SPATA16Q9BXB7 569 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 SLC17A7Q9P2U7 560 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 STXBP5LQ9Y2K9 1186 aa17.15■□□□□ 0.34
GPC1-201ENST00000264039 CHRNB2P17787 502 aa17.14■□□□□ 0.34
GPC1-201ENST00000264039 NELFEP18615 380 aaKnown RBP17.14■□□□□ 0.34
GPC1-201ENST00000264039 ARHGEF19Q8IW93 802 aa17.14■□□□□ 0.34
GPC1-201ENST00000264039 SLC7A6OSQ96CW6 309 aaPredicted RBP17.14■□□□□ 0.34
GPC1-201ENST00000264039 EBF3Q9H4W6 596 aa17.14■□□□□ 0.34
GPC1-201ENST00000264039 USP20Q9Y2K6 914 aa17.14■□□□□ 0.34
GPC1-201ENST00000264039 CASQ2O14958 399 aaPredicted RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 SCNN1DP51172 638 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 AP1B1Q10567 949 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 EFTUD2Q15029 972 aaKnown RBP eCLIP17.14■□□□□ 0.33
GPC1-201ENST00000264039 ZCCHC23Q6ZST2 131 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 CYP2W1Q8TAV3 490 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 ECSITQ9BQ95 431 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 DCUN1D5Q9BTE7 237 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 NMUR2Q9GZQ4 415 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 MAGED2Q9UNF1 606 aaPredicted RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 CTDP1Q9Y5B0 961 aaPredicted RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 CYP19A1P11511 503 aaPredicted RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 AQP5P55064 265 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 RASA3Q14644 834 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 HAS1Q92839 578 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 PPWD1Q96BP3 646 aaKnown RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 PRR11Q96HE9 360 aaPredicted RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 MRPL1Q9BYD6 325 aaKnown RBP17.14■□□□□ 0.33
GPC1-201ENST00000264039 PRKAG3Q9UGI9 489 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 MYH7P12883 1935 aa17.14■□□□□ 0.33
GPC1-201ENST00000264039 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 PDK4Q16654 411 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 CALN1Q9BXU9 219 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 MTO1Q9Y2Z2 717 aaKnown RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 SMAPO00193 183 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 ZMPSTE24O75844 475 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 HLA-DOAP06340 250 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 AKR1B1P15121 316 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 ARL4CP56559 192 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 DLG4P78352 724 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 PRAMEP78395 509 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 MAPK6Q16659 721 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 SPDYCQ5MJ68 293 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 FAM102BQ5T8I3 360 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 LRRC8BQ6P9F7 803 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 ANO5Q75V66 913 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 ARHGEF38Q9NXL2 777 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 DIP2AQ14689 1571 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 TTC36A6NLP5 189 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 TLR3O15455 904 aaKnown RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 SEC24DO94855 1032 aaPredicted RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 SLURP2P0DP57 97 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 MSX2P35548 267 aaPredicted RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 C16orf72Q14CZ0 275 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 ATP13A4Q4VNC1 1196 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 C11orf63Q6NUN7 778 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 TRABD2AQ86V40 505 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 EIF2AK1Q9BQI3 630 aaKnown RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 TCHPQ9BT92 498 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 CCDC134Q9H6E4 229 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 TXNDC16Q9P2K2 825 aa17.13■□□□□ 0.33
GPC1-201ENST00000264039 SAE1Q9UBE0 346 aaPredicted RBP17.13■□□□□ 0.33
GPC1-201ENST00000264039 ZNF212Q9UDV6 495 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms