RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 CD302Q8IX05 232 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 ZBTB10Q96DT7 871 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 C11orf70Q9BRQ4 267 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 DPH5Q9H2P9 285 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 RPF1Q9H9Y2 349 aaKnown RBP13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 ERLIN2O94905 339 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 CFHP08603 1231 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 CAPN2P17655 700 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 TMOD1P28289 359 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 MTMR3Q13615 1198 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 EEF1DP3Q658K8 133 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 DUPD1Q68J44 220 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 MAMDC4Q6UXC1 1216 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 DPP9Q86TI2 863 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 JAMLQ86YT9 394 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 BRI3BPQ8WY22 251 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 C18orf8Q96DM3 657 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 ZMYND15Q9H091 742 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 CDT1Q9H211 546 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 NEUROG2Q9H2A3 272 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 MINDY3Q9H8M7 445 aa13.78□□□□□ -0.2
SPTLC1-201ENST00000262554 PODXLO00592 558 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 PROSCO94903 275 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 LSM8O95777 96 aaKnown RBP13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 CD58P19256 250 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 FKBP1BP68106 108 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 TNFAIP2Q03169 654 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 CYP1B1Q16678 543 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 C2CD6Q53TS8 623 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 CCDC137Q6PK04 289 aaKnown RBP13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 MMS22LQ6ZRQ5 1243 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 TRIM31Q9BZY9 425 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 CISHQ9NSE2 258 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 PARVAQ9NVD7 372 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 AKT3Q9Y243 479 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 PLAAQ9Y263 795 aa13.77□□□□□ -0.21
SPTLC1-201ENST00000262554 A0A087WZ62 844 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 PPFIA4O75335 1185 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 KRT14P02533 472 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 IQCF3P0C7M6 154 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 ZNF286BP0CG31 522 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 MCF2P10911 925 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 GBP1P32455 592 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 HSD17B3P37058 310 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 DRG2P55039 364 aaKnown RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 MAMLD1Q13495 774 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 LRIG3Q6UXM1 1119 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 LEKR1Q6ZMV7 388 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 MAIP1Q8WWC4 291 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 FMO2Q99518 471 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 FDXACB1Q9BRP7 624 aaPredicted RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 TRIM7Q9C029 511 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 KATNBL1Q9H079 304 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 GOLGA6L10A6NI86 522 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 FSCN2O14926 492 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 ZEB2O60315 1214 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 CALB1P05937 261 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 CXCL8P10145 99 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 RARAP10276 462 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 PTGIRP43119 386 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 FNTAP49354 379 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 PTP4A2Q12974 167 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 TTMPQ5BVD1 217 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 CCDC105Q8IYK2 499 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 ZDHHC14Q8IZN3 488 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 CEP120Q8N960 986 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 C12orf50Q8NA57 414 aaPredicted RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 TMEM35BQ8NCS4 154 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 KAT6AQ92794 2004 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 ARL8AQ96BM9 186 aa13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
SPTLC1-201ENST00000262554 C16orf70Q9BSU1 422 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms