RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 WHRNQ9P202 907 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 SUFUQ9UMX1 484 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 SNCAIPQ9Y6H5 919 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 EXOC1LA0A1B0GW35 172 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 COPS2P61201 443 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 RPS6P62753 249 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 CLEC16AQ2KHT3 1053 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 ZNF449Q6P9G9 518 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 MCOLN2Q8IZK6 566 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 RSRC1Q96IZ7 334 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 RMDN3Q96TC7 470 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 TRAIPQ9BWF2 469 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 AGO4Q9HCK5 861 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 ADAM22Q9P0K1 906 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 ARL2BPQ9Y2Y0 163 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 TP73O15350 636 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 PSMC4P43686 418 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 TAS2R40P59535 323 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 BSNDQ8WZ55 320 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 VTI1AQ96AJ9 217 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 IWS1Q96ST2 819 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 OSBPL8Q9BZF1 889 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 SLCO1B3Q9NPD5 702 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 PCDHB4Q9Y5E5 795 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 MYBPC2Q14324 1141 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 WLSQ5T9L3 541 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 TMEM161BQ8NDZ6 487 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 OPTNQ96CV9 577 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 GABBR1Q9UBS5 961 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 CYP2C8P10632 490 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 ALCAMQ13740 583 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 BRDTQ58F21 947 aaPredicted RBP15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 ARHGEF18Q6ZSZ5 1173 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 GLIS1Q8NBF1 620 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 GRK7Q8WTQ7 553 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 C10orf88Q9H8K7 445 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 ATAD5Q96QE3 1844 aa15.35■□□□□ 0.05
SFSWAP-201ENST00000261674 IQCA1LA6NCM1 817 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 DYNLT1P63172 113 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 RNASELQ05823 741 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 ARHGEF16Q5VV41 709 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 MFSD5Q6N075 450 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 CKAP2Q8WWK9 683 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 TMEM237Q96Q45 408 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 TMEM109Q9BVC6 243 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 TELO2Q9Y4R8 837 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 TLR3O15455 904 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 CCNE2O96020 404 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 GSTA1P08263 222 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 IVDP26440 423 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 PIK3CAP42336 1068 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 MAGEA4P43358 317 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 IREB2P48200 963 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 PSMC5P62195 406 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 B3GNT9Q6UX72 402 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 EEPD1Q7L9B9 569 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 DDX1Q92499 740 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 SLC10A4Q96EP9 437 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 ANKFY1Q9P2R3 1169 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 MROH7Q68CQ1 1323 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 A0A1B0GUA9 196 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 CFAP73A6NFT4 308 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 CDH16O75309 829 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 BANF1O75531 89 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 MUTP22033 750 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 FOXN2P32314 431 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 LIG4P49917 911 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 FASTKD3Q14CZ7 662 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 USP37Q86T82 979 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 FAM160B2Q86V87 743 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 ANKMY2Q8IV38 441 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 SEPT9Q9UHD8 586 aaPredicted RBP15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 FEM1BQ9UK73 627 aa15.34■□□□□ 0.05
SFSWAP-201ENST00000261674 CA4P22748 312 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 NOP14P78316 857 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 CYP24A1Q07973 514 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 USP50Q70EL3 339 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 ANO5Q75V66 913 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 NLRX1Q86UT6 975 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 ERICH1Q86X53 443 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 CCDC89Q8N998 374 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 SYTL5Q8TDW5 730 aaPredicted RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 ERP27Q96DN0 273 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 FAM167BQ9BTA0 163 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 MTA2O94776 668 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 TCF4P15884 667 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 TARSP26639 723 aaKnown RBP15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 GPC3P51654 580 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 IL9RQ01113 521 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 GPS1Q13098 491 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 MTERF2Q49AM1 385 aa15.33■□□□□ 0.04
SFSWAP-201ENST00000261674 SNRNP48Q6IEG0 339 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms