RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 GARTP22102 1010 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 CDC25CP30307 473 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 STX2P32856 288 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 NPTX2P47972 431 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 MXI1P50539 228 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 STRN3Q13033 797 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 CALCOCO2Q13137 446 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 SETDB1Q15047 1291 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 LRRC14Q15048 493 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 STXBP2Q15833 593 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 SEL1L2Q5TEA6 688 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ANO5Q75V66 913 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ECHDC2Q86YB7 292 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 LMO3Q8TAP4 145 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 UTP4Q969X6 686 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ARHGEF26Q96DR7 871 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 RMDN2Q96LZ7 410 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 TGS1Q96RS0 853 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 CBWD1Q9BRT8 395 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 WNT8AQ9H1J5 351 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 KIAA1586Q9HCI6 787 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 PAPOLBQ9NRJ5 636 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 LGALS13Q9UHV8 139 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ASB3Q9Y575 518 aa11.48□□□□□ -0.57
CHRNA1-201ENST00000261007 ARID2Q68CP9 1835 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MAGEB2O15479 319 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 TPBGLP0DKB5 382 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 PEX5P50542 639 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 RASSF2P50749 326 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MGAT5Q09328 741 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 PDCD2Q16342 344 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 TSNAXIP1Q2TAA8 658 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 BRDTQ58F21 947 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 THEMIS2Q5TEJ8 643 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 CGB2Q6NT52 195 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 GALNT15Q8N3T1 639 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 UHMK1Q8TAS1 419 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MGARPQ8TDB4 240 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 IKZF4Q9H2S9 585 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 CDC42EP4Q9H3Q1 356 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 KCNK9Q9NPC2 374 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 NKIRAS1Q9NYS0 192 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 TRIM33Q9UPN9 1127 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 STARD13Q9Y3M8 1113 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 ADGRA3Q8IWK6 1321 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 DENND3A2RUS2 1198 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 TRAFD1O14545 582 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MTA2O94776 668 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 SUPT20HL2P0C7V6 817 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 BRAFP15056 766 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 ITIH2P19823 946 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 ABCB4P21439 1286 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 PCK1P35558 622 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 POLGP54098 1239 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MFAP3P55082 362 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 ACTR2P61160 394 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MXRA7P84157 204 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 CAV1Q03135 178 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 KLC1Q07866 573 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 LONRF1Q17RB8 773 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 KCTD19Q17RG1 926 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 PLA2G4FQ68DD2 849 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 KRT39Q6A163 491 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 ABHD15Q6UXT9 468 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 SYDE1Q6ZW31 735 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 RDH13Q8NBN7 331 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 ASAP3Q8TDY4 903 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 MPHOSPH6Q99547 160 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 GPR88Q9GZN0 384 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 THAP2Q9H0W7 228 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 PCIF1Q9H4Z3 704 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 LRRC19Q9H756 370 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 TMEM8AQ9HCN3 771 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 NKX1-2Q9UD57 310 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 COG5Q9UP83 839 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 COQ4Q9Y3A0 265 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 CSADQ9Y600 493 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 USH1CQ9Y6N9 552 aa11.47□□□□□ -0.57
CHRNA1-201ENST00000261007 WDR81Q562E7 1941 aa11.46□□□□□ -0.57
CHRNA1-201ENST00000261007 KIAA1217Q5T5P2 1943 aa11.46□□□□□ -0.57
CHRNA1-201ENST00000261007 SSC5DA1L4H1 1573 aa11.46□□□□□ -0.57
CHRNA1-201ENST00000261007 HNRNPCL1O60812 293 aaKnown RBP11.46□□□□□ -0.58
CHRNA1-201ENST00000261007 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.58
CHRNA1-201ENST00000261007 SMIM24O75264 130 aa11.46□□□□□ -0.58
CHRNA1-201ENST00000261007 DCTN3O75935 186 aa11.46□□□□□ -0.58
CHRNA1-201ENST00000261007 STBD1O95210 358 aa11.46□□□□□ -0.58
CHRNA1-201ENST00000261007 TTC4O95801 387 aa11.46□□□□□ -0.58
CHRNA1-201ENST00000261007 TAC1P20366 129 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms