RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 FGGP02679 453 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 CYP1A1P04798 512 aaPredicted RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 CAPN2P17655 700 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 PROZP22891 400 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 CTNNA2P26232 953 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 HSPA9P38646 679 aaKnown RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 ZNF132P52740 706 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ZNF677Q86XU0 584 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ZDHHC14Q8IZN3 488 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 IQCKQ8N0W5 287 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 TSEN34Q9BSV6 310 aaKnown RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ERVK-5Q9HDB9 667 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 AVENQ9NQS1 362 aaPredicted RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 UVRAGQ9P2Y5 699 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 CHORDC1Q9UHD1 332 aaPredicted RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 GOLGA6BA6NDN3 693 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 MMP3P08254 477 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 COMTP21964 271 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 CTNNA1P35221 906 aaKnown RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 EFNA5P52803 228 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 PURAQ00577 322 aaKnown RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 CUL1Q13616 776 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ALS2CLQ60I27 953 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 SPOPLQ6IQ16 392 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ZNF564Q8TBZ8 553 aaPredicted RBP18.88■□□□□ 0.61
SSB-201ENST00000260956 WHAMMQ8TF30 809 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ZBTB9Q96C00 473 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 ZNF653Q96CK0 615 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 NUP85Q9BW27 656 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 NEUROG2Q9H2A3 272 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 PLEKHA4Q9H4M7 779 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 UMODL1Q5DID0 1318 aa18.88■□□□□ 0.61
SSB-201ENST00000260956 CLTAP09496 248 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 PIK3CAP42336 1068 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 LAMTOR4Q0VGL1 99 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 CUL2Q13617 745 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 LAMC2Q13753 1193 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 PPTC7Q8NI37 304 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 SPATA33Q96N06 139 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 FNBP1Q96RU3 617 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 ACO2Q99798 780 aaKnown RBP18.87■□□□□ 0.61
SSB-201ENST00000260956 PTPRHQ9HD43 1115 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 ANKFY1Q9P2R3 1169 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 PCDHB2Q9Y5E7 798 aa18.87■□□□□ 0.61
SSB-201ENST00000260956 A0A0U1RQG5 324 aaPredicted RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 MOXD2PA6NHM9 499 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 TOM1L1O75674 476 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 CENPCQ03188 943 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 MCL1Q07820 350 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 ZNF211Q13398 564 aaPredicted RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 HSP90B2PQ58FF3 399 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 SLC39A5Q6ZMH5 540 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 MON1BQ7L1V2 547 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 KAT2BQ92831 832 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 AMACRQ9UHK6 382 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 NUB1Q9Y5A7 615 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 HOXD8P13378 290 aaPredicted RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 TNNI1P19237 187 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 TNFSF9P41273 254 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 CPT1AP50416 773 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 SLC26A2P50443 739 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 MLLT1Q03111 559 aaPredicted RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 SIX1Q15475 284 aaPredicted RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 AADACL2Q6P093 401 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 ZNF771Q7L3S4 317 aaPredicted RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 CD302Q8IX05 232 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 MCOLN2Q8IZK6 566 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 LINC01465Q8N7H1 131 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 TCP11Q8WWU5 503 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 MRPL4Q9BYD3 311 aaKnown RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 WNT8AQ9H1J5 351 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 AZI2Q9H6S1 392 aa18.86■□□□□ 0.61
SSB-201ENST00000260956 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.86■□□□□ 0.61
SSB-201ENST00000260956 CPSF3Q9UKF6 684 aaKnown RBP18.86■□□□□ 0.61
SSB-201ENST00000260956 TTI1O43156 1089 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 ASS1P00966 412 aaKnown RBP18.85■□□□□ 0.61
SSB-201ENST00000260956 MYL3P08590 195 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 KRT5P13647 590 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 NOP14P78316 857 aaKnown RBP18.85■□□□□ 0.61
SSB-201ENST00000260956 MXD4Q14582 209 aaPredicted RBP18.85■□□□□ 0.61
SSB-201ENST00000260956 CYP1B1Q16678 543 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 SMYD5Q6GMV2 418 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 WDR49Q8IV35 697 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 BTBD6Q96KE9 485 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 ALPK3Q96L96 1907 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 ZIM3Q96PE6 472 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 FZD8Q9H461 694 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 FAM204AQ9H8W3 233 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 PCDHA3Q9Y5H8 950 aa18.85■□□□□ 0.61
SSB-201ENST00000260956 MROH7Q68CQ1 1323 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 PHACTR2O75167 634 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 PRKCBP05771 671 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 MARK3P27448 753 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 PTGIRP43119 386 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 NOMO3P69849 1222 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 PTP4A2Q12974 167 aa18.84■□□□□ 0.61
SSB-201ENST00000260956 MESDQ14696 234 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms