RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CLMNQ96JQ2 1002 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 TRIM8Q9BZR9 551 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 NDFIP2Q9NV92 336 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 AIPL1Q9NZN9 384 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 E7ENQ6 273 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF185O15231 689 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 SLC16A4O15374 487 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 VCPP55072 806 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 LRRC14Q15048 493 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 TRIM16LQ309B1 348 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 SLC44A4Q53GD3 710 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 TWF2Q6IBS0 349 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 CYFIP1Q7L576 1253 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 METTL16Q86W50 562 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 OTULINQ96BN8 352 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 SIKE1Q9BRV8 207 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 TMEM245Q9H330 911 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 VCPKMTQ9H867 229 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 PLEKHA5Q9HAU0 1116 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 CASS4Q9NQ75 786 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 MAP3K20Q9NYL2 800 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 STMN3Q9NZ72 180 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 NDUFA13Q9P0J0 144 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 OVOS2A0A0G2JMS6 1433 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 OVOS2A0A0J9YW53 1432 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 OVOS2Q6IE36 1432 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF839A8K0R7 811 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 IMPDH2P12268 514 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 GEMIN4P57678 1058 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 PTPN12Q05209 780 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 PDK1Q15118 436 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 KYNUQ16719 465 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 RCSD1Q6JBY9 416 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 KDM7AQ6ZMT4 941 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 ARHGAP27Q6ZUM4 889 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 RRM2BQ7LG56 351 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF677Q86XU0 584 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 RTKN2Q8IZC4 609 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 RSPH1Q8WYR4 309 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 PPP1R36Q96LQ0 422 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 RBBP8Q99708 897 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 SH3GL2Q99962 352 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 THTPAQ9BU02 230 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 UNC45AQ9H3U1 944 aa5.03□□□□□ -1.6
RC3H1-201ENST00000258349 PIH1D3Q9NQM4 214 aaKnown RBP5.03□□□□□ -1.6
RC3H1-201ENST00000258349 MYO5AQ9Y4I1 1855 aaKnown RBP5.03□□□□□ -1.61
RC3H1-201ENST00000258349 MTSS1O43312 755 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SEC24DO94855 1032 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 APBA3O96018 575 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 FCGR1AP12314 374 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 EIF2AK2P19525 551 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 YWHABP31946 246 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 STILQ15468 1287 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RABGAP1LQ5R372 815 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PTPRN2Q92932 1015 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RNF25Q96BH1 459 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MCEEQ96PE7 176 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 XPO6Q96QU8 1125 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CCSER1Q9C0I3 900 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 BRD8Q9H0E9 1235 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ISCUQ9H1K1 167 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TJP2Q9UDY2 1190 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TUBGCP4Q9UGJ1 667 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 AGO2Q9UKV8 859 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 UBR2Q8IWV8 1755 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SCN11AQ9UI33 1791 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF609O15014 1411 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM120BA0PK00 339 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM132DQ14C87 1099 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ACBD5Q5T8D3 534 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ANKRD40Q6AI12 368 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF746Q6NUN9 644 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ERP27Q96DN0 273 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 C3orf70A6NLC5 250 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MYO1GB0I1T2 1018 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 POLBP06746 335 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 NNMTP40261 264 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 TTC33Q6PID6 262 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 COL23A1Q86Y22 540 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 ELMO2Q96JJ3 720 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SLC40A1Q9NP59 571 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 GEMIN8Q9NWZ8 242 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PAK5Q9P286 719 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 COL15A1P39059 1388 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 PNPLA7Q6ZV29 1317 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MAGEA13PA6NCF6 341 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 SNTNA6NMZ2 147 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 O00370 1275 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 MYL3P08590 195 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 FNTAP49354 379 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CLK1P49759 484 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CCZ1BP86790 482 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 CCZ1P86791 482 aaPredicted RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RCN1Q15293 331 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 EDRF1Q3B7T1 1238 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 RFX8Q6ZV50 586 aa5.02□□□□□ -1.61
RC3H1-201ENST00000258349 FASTKD5Q7L8L6 764 aaKnown RBP5.02□□□□□ -1.61
RC3H1-201ENST00000258349 KCTD17Q8N5Z5 321 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms