RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 A8MUI8 341 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 O00370 1275 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 CALB2P22676 271 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 GMPSP49915 693 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 EPHB1P54762 984 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 AP2B1P63010 937 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 UBAP2Q5T6F2 1119 aaKnown RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 NOP9Q86U38 636 aaKnown RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 NETO2Q8NC67 525 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 CARD9Q9H257 536 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 TRABDQ9H4I3 376 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 CRYBG1Q9Y4K1 1723 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 MAGEA13PA6NCF6 341 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 SGK1O00141 431 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 CACNA2D1P54289 1103 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 LACTB2Q53H82 288 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 ARMC3Q5W041 872 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 MAP7D3Q8IWC1 876 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 INPP4AQ96PE3 977 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 HSD17B14Q9BPX1 270 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 MIS12Q9H081 205 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 ZCWPW1Q9H0M4 648 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 RAB20Q9NX57 234 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 YWHAGP61981 247 aaKnown RBP eCLIP12.18□□□□□ -0.46
SOX9-201ENST00000245479 RGS9BPQ6ZS82 235 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 SYTL5Q8TDW5 730 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 ZNF483Q8TF39 744 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 SNRNP27Q8WVK2 155 aaKnown RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 COG5Q9UP83 839 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 EXOC7Q9UPT5 735 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 TTLL3Q9Y4R7 772 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 NID2Q14112 1375 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 WDR64B1ANS9 1081 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 GSTA2P09210 222 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 VCAM1P19320 739 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 NR1H3Q13133 447 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 SV2AQ7L0J3 742 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 STK32AQ8WU08 396 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 RSAD2Q8WXG1 361 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 RNPEPL1Q9HAU8 725 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 ZSCAN5DPP0CG00 497 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 ACADSP16219 412 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 FECHP22830 423 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 NCALDP61601 193 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 SLC15A2Q16348 729 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 KRT39Q6A163 491 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 NT5DC3Q86UY8 548 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 MCF2L2Q86YR7 1114 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 HSPH1Q92598 858 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PGM2Q96G03 612 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 SNF8Q96H20 258 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 SPECC1L-ADORA2AF8WAN1 911 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PSMD10O75832 226 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 SMARCA1P28370 1054 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 EPHB2P29323 1055 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PRKCEQ02156 737 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 LMNB2Q03252 620 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 ZBTB41Q5SVQ8 909 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 FBXL13Q8NEE6 735 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 IFT122Q9HBG6 1241 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PDP2Q9P2J9 529 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 FBXO40Q9UH90 709 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
SOX9-201ENST00000245479 PHTF1Q9UMS5 762 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
SOX9-201ENST00000245479 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 LGR5O75473 907 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 RARGP13631 454 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 CPA2P48052 419 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 KDSRQ06136 332 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 MED21Q13503 144 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 R3HDM1Q15032 1099 aaKnown RBP12.16□□□□□ -0.46
SOX9-201ENST00000245479 MAP7D1Q3KQU3 841 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 MDH1BQ5I0G3 518 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 SNX30Q5VWJ9 437 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 TMEM206Q9H813 350 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 FEM1BQ9UK73 627 aa12.16□□□□□ -0.46
SOX9-201ENST00000245479 ZNRF3Q9ULT6 936 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms