RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FLRT1Q9NZU1 646 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 ADAM22Q9P0K1 906 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 GNEQ9Y223 722 aaKnown RBP19.71■□□□□ 0.75
HOXC11-201ENST00000243082 DYNC1LI2O43237 492 aaPredicted RBP19.71■□□□□ 0.75
HOXC11-201ENST00000243082 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 TMEM130Q8N3G9 435 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 C1orf127Q8N9H9 656 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 EIF1ADQ8N9N8 165 aaKnown RBP19.71■□□□□ 0.75
HOXC11-201ENST00000243082 NMRK2Q9NPI5 230 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 SETD4Q9NVD3 440 aa19.71■□□□□ 0.75
HOXC11-201ENST00000243082 A6NJR5 290 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 TTI1O43156 1089 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 TSPAN1O60635 241 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 ECHS1P30084 290 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 SLC10A6Q3KNW5 377 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 LIN9Q5TKA1 542 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 JADE1Q6IE81 842 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 SCARA5Q6ZMJ2 495 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 ZDHHC14Q8IZN3 488 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 CXorf38Q8TB03 319 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 FAM71BQ8TC56 605 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 CELF4Q9BZC1 486 aaKnown RBP19.7■□□□□ 0.74
HOXC11-201ENST00000243082 DOCK3Q8IZD9 2030 aa19.7■□□□□ 0.74
HOXC11-201ENST00000243082 GGCXP38435 758 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 C1QBPQ07021 282 aaKnown RBP19.69■□□□□ 0.74
HOXC11-201ENST00000243082 MAMLD1Q13495 774 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 PPP2R5EQ16537 467 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 KCTD19Q17RG1 926 aaPredicted RBP19.69■□□□□ 0.74
HOXC11-201ENST00000243082 ZNF394Q53GI3 561 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 HSP90B2PQ58FF3 399 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 SEL1L2Q5TEA6 688 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 MMS22LQ6ZRQ5 1243 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 ZNF410Q86VK4 478 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 SEC14L1Q92503 715 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 ASB7Q9H672 318 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 POLIQ9UNA4 740 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 GOLGA6L10A0A0M3HER8 536 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 A0A1B0GUA9 196 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 BRD2P25440 801 aaKnown RBP19.69■□□□□ 0.74
HOXC11-201ENST00000243082 ZNF157P51786 506 aaPredicted RBP19.69■□□□□ 0.74
HOXC11-201ENST00000243082 RWDD2BP57060 319 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 IRF5Q13568 498 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 CUL1Q13616 776 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 SMYD5Q6GMV2 418 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 PLEKHA7Q6IQ23 1121 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 PPP1R2P3Q6NXS1 205 aa19.69■□□□□ 0.74
HOXC11-201ENST00000243082 DDX42Q86XP3 938 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXC11-201ENST00000243082 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXC11-201ENST00000243082 RRN3P2A6NIE6 340 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 MYO1FO00160 1098 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 KRT19P08727 400 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 ZNF865P0CJ78 1059 aaPredicted RBP19.68■□□□□ 0.74
HOXC11-201ENST00000243082 HSPA6P17066 643 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 MMP8P22894 467 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 SLC1A1P43005 524 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 GYS2P54840 703 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 TAF1CQ15572 869 aaPredicted RBP19.68■□□□□ 0.74
HOXC11-201ENST00000243082 PRELID2Q8N945 189 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 WHAMMQ8TF30 809 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 TFAP2BQ92481 460 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 KAT2BQ92831 832 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 SCLT1Q96NL6 688 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 BCO2Q9BYV7 579 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 ADAMTS10Q9H324 1103 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 NXF1Q9UBU9 619 aaKnown RBP19.68■□□□□ 0.74
HOXC11-201ENST00000243082 FAN1Q9Y2M0 1017 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 GOLGA6BA6NDN3 693 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 MANSC4A6NHS7 340 aaPredicted RBP19.68■□□□□ 0.74
HOXC11-201ENST00000243082 F2P00734 622 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 GUCY2FP51841 1108 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 KYAT1Q16773 422 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 OLFML2BQ68BL8 750 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 ILDR2Q71H61 639 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 RIN2Q8WYP3 895 aaPredicted RBP19.68■□□□□ 0.74
HOXC11-201ENST00000243082 USP6NLQ92738 828 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 KAT6AQ92794 2004 aa19.68■□□□□ 0.74
HOXC11-201ENST00000243082 TCRBV7S2A1N4TA0A589 114 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 ERLIN2O94905 339 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 LSM8O95777 96 aaKnown RBP19.67■□□□□ 0.74
HOXC11-201ENST00000243082 ITGB3P05106 788 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 FGFR4P22455 802 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 IRX5P78411 483 aaPredicted RBP19.67■□□□□ 0.74
HOXC11-201ENST00000243082 KIZQ2M2Z5 673 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 WDR72Q3MJ13 1102 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 SLC13A5Q86YT5 568 aaPredicted RBP19.67■□□□□ 0.74
HOXC11-201ENST00000243082 MREGQ8N565 214 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 LENG1Q96BZ8 264 aaPredicted RBP19.67■□□□□ 0.74
HOXC11-201ENST00000243082 MRPL47Q9HD33 250 aaKnown RBP19.67■□□□□ 0.74
HOXC11-201ENST00000243082 VPS18Q9P253 973 aa19.67■□□□□ 0.74
HOXC11-201ENST00000243082 PHF2O75151 1096 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 PROSCO94903 275 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 SMIM10L2AP0DMW4 78 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 SMIM10L2BP0DMW5 78 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 RAP1GAPP47736 663 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 FAM193AP78312 1265 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 CCL14Q16627 93 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 ZNF667Q5HYK9 610 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 C17orf99Q6UX52 265 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 WDTC1Q8N5D0 677 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 PPP1R13LQ8WUF5 828 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms