RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CDR2Q01850 454 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 CLUL1Q15846 466 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 ISLR2Q6UXK2 745 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 CCNJLQ8IV13 435 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 DNAJC9Q8WXX5 260 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 RBM41Q96IZ5 413 aaKnown RBP9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 TMEM109Q9BVC6 243 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 LRRC19Q9H756 370 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 KLHL14Q9P2G3 628 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 SLC12A4Q9UP95 1085 aa9.98□□□□□ -0.81
HLA-DOA-201ENST00000229829 ASTN2O75129 1339 aaPredicted RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 SNX3O60493 162 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 GGPS1O95749 300 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 KRT5P13647 590 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 KCNA3P22001 575 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 MFAP3P55082 362 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 LMBRD2Q68DH5 695 aaPredicted RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 CYFIP1Q7L576 1253 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 CPA5Q8WXQ8 436 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 CCPG1Q9ULG6 757 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 USP15Q9Y4E8 981 aaPredicted RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZNF536O15090 1300 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 PDE6CP51160 858 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 ITGA8P53708 1063 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 ITIH4Q14624 930 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 TKFCQ3LXA3 575 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 KRT39Q6A163 491 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 C12orf56Q8IXR9 622 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 AGO4Q9HCK5 861 aaKnown RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 HAO1Q9UJM8 370 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 FSCN2O14926 492 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 ENTPD5O75356 428 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 CFHP08603 1231 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 EIF2AK2P19525 551 aaKnown RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 STX2P32856 288 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 MRPS35P82673 323 aaKnown RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 SLC5A9Q2M3M2 681 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 OLFML2BQ68BL8 750 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 SLC39A4Q6P5W5 647 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 RHBDF2Q6PJF5 856 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 TTC8Q8TAM2 541 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 BSNDQ8WZ55 320 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 MMADHCQ9H3L0 296 aaPredicted RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 CCDC134Q9H6E4 229 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 EHMT1Q9H9B1 1298 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 HERC5Q9UII4 1024 aaKnown RBP9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 TELO2Q9Y4R8 837 aa9.97□□□□□ -0.81
HLA-DOA-201ENST00000229829 RRM1P23921 792 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 MAPK4P31152 587 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 FKBP1AP62942 108 aaKnown RBP9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 ZNF268Q14587 947 aaPredicted RBP9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 SETDB1Q15047 1291 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 XKR9Q5GH70 373 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 ACAD10Q6JQN1 1059 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 MFSD5Q6N075 450 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 SV2AQ7L0J3 742 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 ANKS1BQ7Z6G8 1248 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 GALNT15Q8N3T1 639 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 C12orf50Q8NA57 414 aaPredicted RBP9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 POMGNT1Q8WZA1 660 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 RAB20Q9NX57 234 aa9.96□□□□□ -0.81
HLA-DOA-201ENST00000229829 MYCLP12524 364 aaPredicted RBP9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 HSD17B4P51659 736 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 TMED1Q13445 227 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 MTMR1Q13613 665 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 ACBD5Q5T8D3 534 aaPredicted RBP9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 TAOK1Q7L7X3 1001 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 TMEM161BQ8NDZ6 487 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 MORC4Q8TE76 937 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 CLEC4DQ8WXI8 215 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 TAAR1Q96RJ0 339 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 RMI1Q9H9A7 625 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 PCMTD2Q9NV79 361 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 GALNT8Q9NY28 637 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 LNPEPQ9UIQ6 1025 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 TBX20Q9UMR3 447 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 MROH7Q68CQ1 1323 aa9.96□□□□□ -0.82
HLA-DOA-201ENST00000229829 DENND3A2RUS2 1198 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 CCNE2O96020 404 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 CAP2P40123 477 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 NPTX2P47972 431 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 GCLCP48506 637 aaPredicted RBP9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 MFSD4BQ5TF39 518 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 TRMT10CQ7L0Y3 403 aaKnown RBP9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 FBXL13Q8NEE6 735 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 ERP27Q96DN0 273 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 C9orf72Q96LT7 481 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 RUNDC3BQ96NL0 473 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 NT5C1BQ96P26 610 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 PREBQ9HCU5 417 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 UVRAGQ9P2Y5 699 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 CHMP2BQ9UQN3 213 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
HLA-DOA-201ENST00000229829 RAD17O75943 681 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms