RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SCINQ9Y6U3 715 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 CD58P19256 250 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 KLRC2P26717 231 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 EMC2Q15006 297 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 PREPLQ4J6C6 727 aaPredicted RBP17.27■□□□□ 0.36
LTBR-201ENST00000228918 TMEM270Q6UE05 265 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 CCDC63Q8NA47 563 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 NSUN6Q8TEA1 469 aaKnown RBP17.27■□□□□ 0.36
LTBR-201ENST00000228918 KCNN1Q92952 543 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 EURLQ9NYK6 297 aa17.27■□□□□ 0.36
LTBR-201ENST00000228918 ZNF541Q9H0D2 1346 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 CDH16O75309 829 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 GH1P01241 217 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 STRN3Q13033 797 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 FAM133BQ5BKY9 247 aaKnown RBP17.27■□□□□ 0.35
LTBR-201ENST00000228918 NUGGCQ68CJ6 796 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 SNRNP48Q6IEG0 339 aaKnown RBP17.27■□□□□ 0.35
LTBR-201ENST00000228918 HIBCHQ6NVY1 386 aaPredicted RBP17.27■□□□□ 0.35
LTBR-201ENST00000228918 CNTN6Q9UQ52 1028 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 USTQ9Y2C2 406 aa17.27■□□□□ 0.35
LTBR-201ENST00000228918 TLR3O15455 904 aaKnown RBP17.26■□□□□ 0.35
LTBR-201ENST00000228918 PIGRP01833 764 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 CLTAP09496 248 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 POTEJP0CG39 1038 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 SSTR3P32745 418 aaPredicted RBP17.26■□□□□ 0.35
LTBR-201ENST00000228918 GJC1P36383 396 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
LTBR-201ENST00000228918 TNFAIP1Q13829 316 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 XKR3Q5GH77 459 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 WLSQ5T9L3 541 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 RBBP8NLQ8NC74 664 aaPredicted RBP17.26■□□□□ 0.35
LTBR-201ENST00000228918 C9orf72Q96LT7 481 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 RBAKQ9NYW8 714 aaPredicted RBP17.26■□□□□ 0.35
LTBR-201ENST00000228918 AGAP1Q9UPQ3 857 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 SUN1O94901 812 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 UBOX5O94941 541 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
LTBR-201ENST00000228918 STAT4Q14765 748 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 PPP1R2P3Q6NXS1 205 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 GDAP1Q8TB36 358 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 CDHR1Q96JP9 859 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 TBK1Q9UHD2 729 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 KCNG1Q9UIX4 513 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 MCM8Q9UJA3 840 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 NAALADL1Q9UQQ1 740 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 ACTL7BQ9Y614 415 aa17.26■□□□□ 0.35
LTBR-201ENST00000228918 GJB6O95452 261 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 EGFRP00533 1210 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 ABHD2P08910 425 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 KCNA3P22001 575 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 TBXAS1P24557 533 aaPredicted RBP17.25■□□□□ 0.35
LTBR-201ENST00000228918 NOP14P78316 857 aaKnown RBP17.25■□□□□ 0.35
LTBR-201ENST00000228918 NEDD9Q14511 834 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 P3H1Q32P28 736 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 ZBTB41Q5SVQ8 909 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 MIS18BP1Q6P0N0 1132 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 PRUNE1Q86TP1 453 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 ZCCHC9Q8N567 271 aaKnown RBP17.25■□□□□ 0.35
LTBR-201ENST00000228918 FEZF2Q8TBJ5 459 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 ASAP3Q8TDY4 903 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 ZBTB45Q96K62 511 aaPredicted RBP17.25■□□□□ 0.35
LTBR-201ENST00000228918 FOXP3Q9BZS1 431 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 NUB1Q9Y5A7 615 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 LCTP09848 1927 aa17.25■□□□□ 0.35
LTBR-201ENST00000228918 ATP6V1G2O95670 118 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 SSR1P43307 286 aaKnown RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 OAZ1P54368 228 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 NCALDP61601 193 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 NFX1Q12986 1120 aaKnown RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 GALNTL6Q49A17 601 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 SPATA21Q7Z572 469 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 SRRM1Q8IYB3 904 aaKnown RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 CCDC77Q9BR77 488 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 PARVAQ9NVD7 372 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 ZNF214Q9UL59 606 aaPredicted RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 LIASO43766 372 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 DPEP1P16444 411 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 GLRA2P23416 452 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 BACE1P56817 501 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 TMEM63BQ5T3F8 832 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 SLFN12LQ6IEE8 588 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 ARHGEF18Q6ZSZ5 1173 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 CEP128Q6ZU80 1094 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 GSTA5Q7RTV2 222 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 RIBC1Q8N443 379 aaPredicted RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 MAGEB18Q96M61 343 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
LTBR-201ENST00000228918 RBM15Q96T37 977 aaKnown RBP eCLIP17.24■□□□□ 0.35
LTBR-201ENST00000228918 PORCNQ9H237 461 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 KLHL11Q9NVR0 708 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 IP6K2Q9UHH9 426 aa17.24■□□□□ 0.35
LTBR-201ENST00000228918 GGT7Q9UJ14 662 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms