RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MRPL58Q14197 206 aaKnown RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 SMAD2Q15796 467 aaKnown RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 PDXDC1Q6P996 788 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 LILRA6Q6PI73 481 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 NT5DC4Q86YG4 428 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 GUF1Q8N442 669 aaKnown RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 CSGALNACT2Q8N6G5 542 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 SPATA20Q8TB22 786 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 GOLGA5Q8TBA6 731 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 PLEKHO2Q8TD55 490 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 GSDMAQ96QA5 445 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 UHRF1Q96T88 793 aaPredicted RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 INTS13Q9NVM9 706 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 DZANK1Q9NVP4 752 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
LSM5-201ENST00000223084 AGAP1Q9UPQ3 857 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
LSM5-201ENST00000223084 C5orf42Q9H799 3197 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 CALUO43852 315 aaPredicted RBP13.69□□□□□ -0.22
LSM5-201ENST00000223084 TBC1D4O60343 1298 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 RFPL2O75678 378 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 KIF20AO95235 890 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 KRT19P08727 400 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 PRCPP42785 496 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 PSMD6Q15008 389 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 SURF1Q15526 300 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 ZNF658Q5TYW1 1059 aaPredicted RBP13.69□□□□□ -0.22
LSM5-201ENST00000223084 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
LSM5-201ENST00000223084 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 APPL2Q8NEU8 664 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 SUSD6Q92537 303 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 BORCS6Q96GS4 357 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 MFSD14AQ96MC6 490 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
LSM5-201ENST00000223084 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 SFXN1Q9H9B4 322 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 CD320Q9NPF0 282 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 FBXL5Q9UKA1 691 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 MAN1B1Q9UKM7 699 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 TRAF3IP3Q9Y228 551 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 FAM50BQ9Y247 325 aa13.69□□□□□ -0.22
LSM5-201ENST00000223084 H7C4K7 107 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 BIN1O00499 593 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 CYB561D2O14569 222 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 TNNC2P02585 160 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 TNNI1P19237 187 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 TAF6P49848 677 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 ROR1Q01973 937 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
LSM5-201ENST00000223084 BFSP1Q12934 665 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 RAB33AQ14088 237 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 CBX2Q14781 532 aaPredicted RBP13.68□□□□□ -0.22
LSM5-201ENST00000223084 CAMK4Q16566 473 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 DUOXA2Q1HG44 320 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 CES5AQ6NT32 575 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 CLEC17AQ6ZS10 378 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 ZNF516Q92618 1163 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 CGRRF1Q99675 332 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 FBXW11Q9UKB1 542 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 C2orf16Q68DN1 1984 aa13.68□□□□□ -0.22
LSM5-201ENST00000223084 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 WDR27A2RRH5 827 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 KPNA7A9QM74 516 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 OR4Q2P0C623 313 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 ODC1P11926 461 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 TYMPP19971 482 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
LSM5-201ENST00000223084 NR2F2P24468 414 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 PLA2G5P39877 138 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 RBP5P82980 135 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 ZP2Q05996 745 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 ITIH3Q06033 890 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 SV2CQ496J9 727 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 ZCWPW2Q504Y3 356 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 OVOS1Q6IE37 1185 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 SLC8B1Q6J4K2 584 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 ZNF280DQ6N043 979 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 USP37Q86T82 979 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 FAM122AQ96E09 287 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 EEF2KMTQ96G04 330 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 ZNF560Q96MR9 790 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 TMEM209Q96SK2 561 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
LSM5-201ENST00000223084 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
LSM5-201ENST00000223084 ZMYND10O75800 440 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 AKAP3O75969 853 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms