RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DGCR14Q96DF8 476 aaKnown RBP14.42□□□□□ -0.1
GABPB1-201ENST00000220429 ERP27Q96DN0 273 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 DRC3Q9H069 523 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 KRT82Q9NSB4 513 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 DYTNA2CJ06 578 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 TBX10O75333 385 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 KRT36O76013 467 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 DPEP1P16444 411 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 DMPKQ09013 629 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 ZYXQ15942 572 aaKnown RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 TAOK1Q7L7X3 1001 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 SCAIQ8N9R8 606 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 SCFD2Q8WU76 684 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 CGREF1Q99674 301 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 EIF2AK1Q9BQI3 630 aaKnown RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 TXLNGYQ9BZA5 131 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 EURLQ9NYK6 297 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 RABL2AQ9UBK7 228 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 COL6A2P12110 1019 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 S100A1P23297 94 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 TCF7P36402 384 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 MEI1Q5TIA1 1274 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 FAAH2Q6GMR7 532 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 SATL1Q86VE3 508 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 SFR1Q86XK3 245 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 CXorf38Q8TB03 319 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 USP33Q8TEY7 942 aa14.41□□□□□ -0.1
GABPB1-201ENST00000220429 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 STMN4Q9H169 189 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 DDX18Q9NVP1 670 aaKnown RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 PACSIN2Q9UNF0 486 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-201ENST00000220429 NOL4O94818 638 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 OR6B1O95007 311 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 EYA4O95677 639 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 PSMC1P62191 440 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 TBL3Q12788 808 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 ADRM1Q16186 407 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 DENND2CQ68D51 928 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 PDXDC1Q6P996 788 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 ZBED8Q8IZ13 594 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 CEP70Q8NHQ1 597 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 FMO2Q99518 471 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 EPB41L4BQ9H329 900 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 EPB41L1Q9H4G0 881 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 BCAS3Q9H6U6 928 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 METTL14Q9HCE5 456 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 ZNF212Q9UDV6 495 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 UMODL1Q5DID0 1318 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 RSPH10B2B2RC85 870 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 TBC1D12O60347 775 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 OPHN1O60890 802 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 STK10O94804 968 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 RSPH10BP0C881 870 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 MYCLP1P12525 358 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 HOXD13P35453 343 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 ACADVLP49748 655 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 UBXN2AP68543 259 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 RELAQ04206 551 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 EDRF1Q3B7T1 1238 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 PUS10Q3MIT2 529 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 FKBP1CQ5VVH2 108 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 RFWD3Q6PCD5 774 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 EPM2AIP1Q7L775 607 aaPredicted RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 CHURC1Q8WUH1 139 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 RUSC1Q9BVN2 902 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 FBXO28Q9NVF7 368 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 AIPL1Q9NZN9 384 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 STX18Q9P2W9 335 aaKnown RBP14.4□□□□□ -0.1
GABPB1-201ENST00000220429 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
GABPB1-201ENST00000220429 SPDYE16A6NNV3 312 aaPredicted RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 PSMG1O95456 288 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 OXSR1O95747 527 aaPredicted RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 POLR2MP0CAP2 368 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 CAP2P40123 477 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 MKRN3Q13064 507 aaKnown RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 SPIDRQ14159 915 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 OTOP1Q7RTM1 612 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 CROCCP2Q86T23 111 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 GDAP1Q8TB36 358 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 SH3GL1Q99961 368 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 DDX47Q9H0S4 455 aaKnown RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 PABPC3Q9H361 631 aaKnown RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 TRAFD1O14545 582 aaPredicted RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 T-ENOLP0DO92 83 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 GTF2H1P32780 548 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 GRIA2P42262 883 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 CCR3P51677 355 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 POLGP54098 1239 aaPredicted RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 ZNF449Q6P9G9 518 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 POTEAQ6S8J7 498 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 Q6ZNX1 250 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 WDR75Q8IWA0 830 aaKnown RBP14.39□□□□□ -0.11
GABPB1-201ENST00000220429 NUP93Q8N1F7 819 aa14.39□□□□□ -0.11
GABPB1-201ENST00000220429 MTMR14Q8NCE2 650 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms