RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 RAB6BQ9NRW1 208 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SCOCQ9UIL1 159 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 ERCC6L2Q5T890 1561 aa19.89■□□□□ 0.77
SMPD3-201ENST00000219334 SUPT20HL2P0C7V6 817 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 MTFR1Q15390 333 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 SLC18A3Q16572 532 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 PATL1Q86TB9 770 aaKnown RBP19.88■□□□□ 0.77
SMPD3-201ENST00000219334 NDE1Q9NXR1 346 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 RPLP2P05387 115 aaKnown RBP19.88■□□□□ 0.77
SMPD3-201ENST00000219334 NCAM1P13591 858 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 ARHGEF26Q96DR7 871 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 MKNK1Q9BUB5 465 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 MLXIPLQ9NP71 852 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 FBXO28Q9NVF7 368 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 RNF103-CHMP3A0A140T963 221 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 LMNAP02545 664 aaKnown RBP19.88■□□□□ 0.77
SMPD3-201ENST00000219334 SETSIPP0DME0 302 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 SFSWAPQ12872 951 aaKnown RBP19.88■□□□□ 0.77
SMPD3-201ENST00000219334 ZC3H12BQ5HYM0 836 aaKnown RBP19.88■□□□□ 0.77
SMPD3-201ENST00000219334 PKN3Q6P5Z2 889 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 UCMAQ8WVF2 138 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 EIF2AQ9BY44 585 aaKnown RBP19.88■□□□□ 0.77
SMPD3-201ENST00000219334 GPR63Q9BZJ6 419 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
SMPD3-201ENST00000219334 PITPNM2Q9BZ72 1349 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 RPSAP08865 295 aaKnown RBP19.87■□□□□ 0.77
SMPD3-201ENST00000219334 RGS4P49798 205 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 GALCP54803 685 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 CDH18Q13634 790 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 STAT4Q14765 748 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SLC35G2Q8TBE7 412 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 DPF3Q92784 378 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 UNC45AQ9H3U1 944 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SELENONQ9NZV5 590 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 PCSK7Q16549 785 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 PTRHD1Q6GMV3 140 aaKnown RBP19.87■□□□□ 0.77
SMPD3-201ENST00000219334 GPAT2Q6NUI2 795 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 NAF1Q96HR8 494 aaKnown RBP19.87■□□□□ 0.77
SMPD3-201ENST00000219334 P4HA2O15460 535 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SUPT3HO75486 399 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 B3GAT3O94766 335 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SLC2A3P11169 496 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 GYS1P13807 737 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 CYP11B2P19099 503 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 CALML6Q8TD86 181 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SYCE1LA8MT33 242 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 ZSCAN9O15535 394 aaPredicted RBP19.87■□□□□ 0.77
SMPD3-201ENST00000219334 GPD1P21695 349 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 ANKMY2Q8IV38 441 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 TAGAPQ8N103 731 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 ATP6V0D2Q8N8Y2 350 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 UBA3Q8TBC4 463 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SEPT8Q92599 483 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 OLFML3Q9NRN5 406 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 PKP3Q9Y446 797 aa19.87■□□□□ 0.77
SMPD3-201ENST00000219334 SLC11A2P49281 568 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 PDCLQ13371 301 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 TRIM4Q9C037 500 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 RRP15Q9Y3B9 282 aaKnown RBP19.86■□□□□ 0.77
SMPD3-201ENST00000219334 PPP2R3BQ9Y5P8 575 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 ZNF263O14978 683 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 CHUKO15111 745 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 DPYDQ12882 1025 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 STK4Q13043 487 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 C1orf146Q5VVC0 180 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 MRPS31Q92665 395 aaKnown RBP19.86■□□□□ 0.77
SMPD3-201ENST00000219334 SPATA16Q9BXB7 569 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 ENTPD7Q9NQZ7 604 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 KLK14Q9P0G3 267 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 ITGB3P05106 788 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 GUCY2CP25092 1073 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMPD3-201ENST00000219334 SPDYAQ5MJ70 313 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 YME1L1Q96TA2 773 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 KIF2CQ99661 725 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 TUBE1Q9UJT0 475 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 CNTNAP5Q8WYK1 1306 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 H0Y626 953 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 KIRREL3Q8IZU9 778 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 OR9Q1Q8NGQ5 310 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 TGS1Q96RS0 853 aaKnown RBP19.86■□□□□ 0.77
SMPD3-201ENST00000219334 RSAD1Q9HA92 442 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 DPP3Q9NY33 737 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 HDAC6Q9UBN7 1215 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 MTSS1O43312 755 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 PPP2R2AP63151 447 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 ZDHHC15Q96MV8 337 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 ZC3H7BQ9UGR2 993 aaKnown RBP19.86■□□□□ 0.77
SMPD3-201ENST00000219334 AMACRQ9UHK6 382 aa19.86■□□□□ 0.77
SMPD3-201ENST00000219334 TECPR2O15040 1411 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 SSU72P8A0A1W2PR75 194 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 ABCE1P61221 599 aaKnown RBP19.85■□□□□ 0.77
SMPD3-201ENST00000219334 USP10Q14694 798 aaKnown RBP19.85■□□□□ 0.77
SMPD3-201ENST00000219334 CD302Q8IX05 232 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 STARD7Q9NQZ5 370 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 RSPH10B2B2RC85 870 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 RSPH10BP0C881 870 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms