RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 BBOF1Q8ND07 529 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 RXFP1Q9HBX9 757 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 PXMP2Q9NR77 195 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 HLA-DRAP01903 254 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 RPSAP08865 295 aaKnown RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 TNNI1P19237 187 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 GARTP22102 1010 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 DSG3P32926 999 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 BPIFB4P59827 614 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 MKRN3Q13064 507 aaKnown RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 STAT4Q14765 748 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 TMED2Q15363 201 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 P3H1Q32P28 736 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 AGAP11Q8TF27 550 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 WNK4Q96J92 1243 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 PAIP2Q9BPZ3 127 aaKnown RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 ADAM22Q9P0K1 906 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 TRIM33Q9UPN9 1127 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 PCDHA10Q9Y5I2 948 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 LTBP3Q9NS15 1303 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 RASA4BC9J798 803 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 RASA4O43374 803 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 ZNF862O60290 1169 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 KLRC2P26717 231 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 FOXN2P32314 431 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 MAGEA4P43358 317 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 WNT7BP56706 349 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 MGAT5Q09328 741 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 STRN3Q13033 797 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 MAMLD1Q13495 774 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 R3HDM1Q15032 1099 aaKnown RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 BRDTQ58F21 947 aaPredicted RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 TMEM63BQ5T3F8 832 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 TLDC1Q6P9B6 456 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 TAS1R3Q7RTX0 852 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 KATNAL2Q8IYT4 538 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 RBM15Q96T37 977 aaKnown RBP eCLIP18.32■□□□□ 0.52
USB1-201ENST00000219281 PLCD4Q9BRC7 762 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 RPAP3Q9H6T3 665 aaPredicted RBP18.32■□□□□ 0.52
USB1-201ENST00000219281 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 STK38LQ9Y2H1 464 aa18.32■□□□□ 0.52
USB1-201ENST00000219281 A8MUI8 341 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 KRT16P08779 473 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 TAC1P20366 129 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 PIK3CAP42336 1068 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 NLRX1Q86UT6 975 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
USB1-201ENST00000219281 FNBP1Q96RU3 617 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
USB1-201ENST00000219281 MTFR1Q15390 333 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 TDRD10Q5VZ19 366 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 PPP1R21Q6ZMI0 780 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 FAM47EQ6ZV65 393 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 RELL1Q8IUW5 271 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ANKRD35Q8N283 1001 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 C17orf75Q9HAS0 396 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 EURLQ9NYK6 297 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ZNF112Q9UJU3 913 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 TELO2Q9Y4R8 837 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 PCDHB4Q9Y5E5 795 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ACTL7BQ9Y614 415 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 PI4K2BG5E9Z4 385 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 TLR3O15455 904 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 EXTL3O43909 919 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 SPAG7O75391 227 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ALADP13716 330 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ACO1P21399 889 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 MYO1EQ12965 1108 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ATP13A4Q4VNC1 1196 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 KAZNQ674X7 775 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 MIS18BP1Q6P0N0 1132 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 DHX37Q8IY37 1157 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 ZCCHC9Q8N567 271 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 GLIS1Q8NBF1 620 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 EXD1Q8NHP7 514 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 CCHCR1Q8TD31 782 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 PITPNM3Q9BZ71 974 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 EBF2Q9HAK2 575 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 MRPL47Q9HD33 250 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 SAYSD1Q9NPB0 183 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 XPNPEP1Q9NQW7 623 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 ARHGEF3Q9NR81 526 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 MAP3K20Q9NYL2 800 aaKnown RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 RIPK3Q9Y572 518 aa18.3■□□□□ 0.52
USB1-201ENST00000219281 CTDP1Q9Y5B0 961 aaPredicted RBP18.3■□□□□ 0.52
USB1-201ENST00000219281 STBD1O95210 358 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 C4BPAP04003 597 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 KRT10P13645 584 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 GBP2P32456 591 aaPredicted RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 ACOT2P49753 483 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 LIG4P49917 911 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 WDR4P57081 412 aaKnown RBP18.29■□□□□ 0.52
USB1-201ENST00000219281 NOMO3P69849 1222 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 IL9RQ01113 521 aa18.29■□□□□ 0.52
USB1-201ENST00000219281 SP4Q02446 784 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms