RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MREGQ8N565 214 aa31.64■■■□□ 2.66
PABPN1-201ENST00000216727 C11orf70Q9BRQ4 267 aa31.64■■■□□ 2.66
PABPN1-201ENST00000216727 MGAMO43451 1857 aa31.64■■■□□ 2.65
PABPN1-201ENST00000216727 GOLGA6BA6NDN3 693 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 MYO1FO00160 1098 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 SYF2O95926 243 aaKnown RBP31.63■■■□□ 2.65
PABPN1-201ENST00000216727 PYGMP11217 842 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 TRADDQ15628 312 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 PLEKHA7Q6IQ23 1121 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 CPNE8Q86YQ8 564 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 CPB2Q96IY4 423 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 SIX4Q9UIU6 781 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 GNEQ9Y223 722 aaKnown RBP31.63■■■□□ 2.65
PABPN1-201ENST00000216727 SCINQ9Y6U3 715 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 IGF2BP3O00425 579 aaKnown RBP eCLIP31.63■■■□□ 2.65
PABPN1-201ENST00000216727 MEFVO15553 781 aaPredicted RBP31.63■■■□□ 2.65
PABPN1-201ENST00000216727 TSPAN1O60635 241 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 ITGBL1O95965 494 aaPredicted RBP31.63■■■□□ 2.65
PABPN1-201ENST00000216727 NFICP08651 508 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 CD58P19256 250 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 AADACL2Q6P093 401 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 RASAL3Q86YV0 1011 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 C1orf127Q8N9H9 656 aa31.63■■■□□ 2.65
PABPN1-201ENST00000216727 KAT6AQ92794 2004 aa31.62■■■□□ 2.65
PABPN1-201ENST00000216727 A0A1B0GUA9 196 aa31.62■■■□□ 2.65
PABPN1-201ENST00000216727 MANSC4A6NHS7 340 aaPredicted RBP31.62■■■□□ 2.65
PABPN1-201ENST00000216727 AGPSO00116 658 aa31.62■■■□□ 2.65
PABPN1-201ENST00000216727 ALS2CLQ60I27 953 aa31.62■■■□□ 2.65
PABPN1-201ENST00000216727 ZNF518BQ9C0D4 1074 aa31.62■■■□□ 2.65
PABPN1-201ENST00000216727 ERVK-5Q9HDB9 667 aa31.62■■■□□ 2.65
PABPN1-201ENST00000216727 TTI1O43156 1089 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 FAM153BP0C7A2 387 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 MMP8P22894 467 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 ECHS1P30084 290 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 MAMLD1Q13495 774 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 FAM153CQ494X1 144 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 PLVAPQ9BX97 442 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 FAM153AQ9UHL3 310 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 ERLIN2O94905 339 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 WEE2P0C1S8 567 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 GGCXP38435 758 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 CDC42EP1Q00587 391 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 DHX34Q14147 1143 aaKnown RBP31.61■■■□□ 2.65
PABPN1-201ENST00000216727 JADE1Q6IE81 842 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 SCLT1Q96NL6 688 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 BCO2Q9BYV7 579 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 TRIM7Q9C029 511 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 PCDHGC3Q9UN70 934 aa31.61■■■□□ 2.65
PABPN1-201ENST00000216727 UTP11Q9Y3A2 253 aaKnown RBP31.61■■■□□ 2.65
PABPN1-201ENST00000216727 DYNC1LI2O43237 492 aaPredicted RBP31.6■■■□□ 2.65
PABPN1-201ENST00000216727 PHF2O75151 1096 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 F2P00734 622 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 SLC10A6Q3KNW5 377 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 C2CD6Q53TS8 623 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 MMS22LQ6ZRQ5 1243 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 SLC13A5Q86YT5 568 aaPredicted RBP31.6■■■□□ 2.65
PABPN1-201ENST00000216727 TSEN2Q8NCE0 465 aaKnown RBP31.6■■■□□ 2.65
PABPN1-201ENST00000216727 CXorf38Q8TB03 319 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 VRTNQ9H8Y1 702 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 SETD4Q9NVD3 440 aa31.6■■■□□ 2.65
PABPN1-201ENST00000216727 PROSCO94903 275 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 ATICP31939 592 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 CHRNA3P32297 505 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 ZNF667Q5HYK9 610 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 ADAT2Q7Z6V5 191 aaKnown RBP31.59■■■□□ 2.65
PABPN1-201ENST00000216727 RAB17Q9H0T7 212 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 NRCAMQ92823 1304 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 FAM187AA6NFU0 413 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 KRT19P08727 400 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 CDH5P33151 784 aaPredicted RBP31.59■■■□□ 2.65
PABPN1-201ENST00000216727 ZNF157P51786 506 aaPredicted RBP31.59■■■□□ 2.65
PABPN1-201ENST00000216727 DR1Q01658 176 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 PRELID2Q8N945 189 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 ADPGKQ9BRR6 497 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 CELF4Q9BZC1 486 aaKnown RBP31.59■■■□□ 2.65
PABPN1-201ENST00000216727 PARVAQ9NVD7 372 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 FAN1Q9Y2M0 1017 aa31.59■■■□□ 2.65
PABPN1-201ENST00000216727 TAF1CQ15572 869 aaPredicted RBP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 LLGL2Q6P1M3 1020 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 SCARA5Q6ZMJ2 495 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 TMEM35BQ8NCS4 154 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 USP6NLQ92738 828 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 FAM114A2Q9NRY5 505 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 VPS18Q9P253 973 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 NXF1Q9UBU9 619 aaKnown RBP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 MTUS1Q9ULD2 1270 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 CALB1P05937 261 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 ZNF865P0CJ78 1059 aaPredicted RBP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 EIF4BP23588 611 aaKnown RBP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 BRD2P25440 801 aaKnown RBP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 SSTR3P32745 418 aaPredicted RBP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 HLTFQ14527 1009 aaKnown RBP eCLIP31.58■■■□□ 2.65
PABPN1-201ENST00000216727 CYP1B1Q16678 543 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 PRAMEF19Q5SWL8 479 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 PHLDB2Q86SQ0 1253 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 NT5DC4Q86YG4 428 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 TRPM7Q96QT4 1865 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 ADAMTS10Q9H324 1103 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 FLRT1Q9NZU1 646 aa31.58■■■□□ 2.65
PABPN1-201ENST00000216727 PCYOX1Q9UHG3 505 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms