RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 EPHB6O15197 1021 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 GFPT2O94808 682 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 CASQ1P31415 396 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNU13-201ENST00000215956 NUBP1P53384 320 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 IGBP1P78318 339 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 UBE3AQ05086 875 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 CYP24A1Q07973 514 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 LAMTOR4Q0VGL1 99 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 TUBB2AQ13885 445 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 SURF1Q15526 300 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 DUSP6Q16828 381 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 C10orf76Q5T2E6 689 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 KRT39Q6A163 491 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
SNU13-201ENST00000215956 ZBTB10Q96DT7 871 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 MAP7D2Q96T17 732 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 CDCA3Q99618 268 aaPredicted RBP13.17□□□□□ -0.3
SNU13-201ENST00000215956 DESI2Q9BSY9 194 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 TUBB2BQ9BVA1 445 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 STK33Q9BYT3 514 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 INTS2Q9H0H0 1204 aaKnown RBP13.17□□□□□ -0.3
SNU13-201ENST00000215956 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
SNU13-201ENST00000215956 USP20Q9Y2K6 914 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 TRPV2Q9Y5S1 764 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 M0QZ92 97 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 ZC3H11AO75152 810 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNU13-201ENST00000215956 LCA5LO95447 670 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
SNU13-201ENST00000215956 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 SLC9A1P19634 815 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 ADSSP30520 456 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PHKA2P46019 1235 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 KIF11P52732 1056 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 AP3M2P53677 418 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 GNG11P61952 73 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 KLHL30Q0D2K2 578 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 KIF5AQ12840 1032 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PAK2Q13177 524 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 EFCAB12Q6NXP0 572 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 RNF149Q8NC42 400 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 APEX2Q9UBZ4 518 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 PCDHB12Q9Y5F1 795 aa13.17□□□□□ -0.3
SNU13-201ENST00000215956 MYH11P35749 1972 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 GVINP1Q7Z2Y8 2422 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 ARID2Q68CP9 1835 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 ZBTB42B2RXF5 422 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
SNU13-201ENST00000215956 TOM1L1O75674 476 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 C22orf31O95567 290 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 PRKCBP05771 671 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 INSRRP14616 1297 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
SNU13-201ENST00000215956 EIF4A3P38919 411 aaKnown RBP13.16□□□□□ -0.3
SNU13-201ENST00000215956 PRKCIP41743 596 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 VAV2P52735 878 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 PSMD6Q15008 389 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 KYAT1Q16773 422 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
SNU13-201ENST00000215956 SYT10Q6XYQ8 523 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 ASCL5Q7RTU5 278 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
SNU13-201ENST00000215956 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 SAAL1Q96ER3 474 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
SNU13-201ENST00000215956 DNAI1Q9UI46 699 aa13.16□□□□□ -0.3
SNU13-201ENST00000215956 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
SNU13-201ENST00000215956 ATP8B3O60423 1300 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 EVPLQ92817 2033 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 CLDN3O15551 220 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
SNU13-201ENST00000215956 PTENP60484 403 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 POU5F1Q01860 360 aaKnown RBP13.15□□□□□ -0.3
SNU13-201ENST00000215956 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 ENOSF1Q7L5Y1 443 aa13.15□□□□□ -0.3
SNU13-201ENST00000215956 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
SNU13-201ENST00000215956 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms