RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 KIAA0319Q5VV43 1072 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 DSTYKQ6XUX3 929 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 SUSD3Q96L08 255 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 NSUN3Q9H649 340 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 NGRNQ9NPE2 291 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 ANO10Q9NW15 660 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 PDCD11Q14690 1871 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 VNN1O95497 513 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 FGFR3P22607 806 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ERCC5P28715 1186 aaPredicted RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 MYL6P60660 151 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 SKOR2Q2VWA4 1001 aaPredicted RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ZSCAN23Q3MJ62 389 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ANO6Q4KMQ2 910 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 CBWD6Q4V339 395 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 CBWD3Q5JTY5 395 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 CBWD5Q5RIA9 395 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 IRF2BP1Q8IU81 584 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 SENP8Q96LD8 212 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 LMCD1Q9NZU5 365 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 TEX28O15482 410 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 LINC01565O15544 149 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ADAM12O43184 909 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 LILRB3O75022 631 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 HYAL1Q12794 435 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 TRPC3Q13507 836 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ZACNQ401N2 412 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 EP400NLQ6ZTU2 488 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 TAS1R2Q8TE23 839 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 SLC35C1Q96A29 364 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 ZNF560Q96MR9 790 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 PI4K2AQ9BTU6 479 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 TLE6Q9H808 572 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
SYPL1-201ENST00000011473 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
SYPL1-201ENST00000011473 M0QZQ0 153 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 CYB561D2O14569 222 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 IKBKBO14920 756 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 NCOA4Q13772 614 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 SPOPLQ6IQ16 392 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 FRMD5Q7Z6J6 570 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 USP37Q86T82 979 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 LRRC52Q8N7C0 313 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 FUCA2Q9BTY2 467 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.33
SYPL1-201ENST00000011473 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
SYPL1-201ENST00000011473 PIK3CAP42336 1068 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PSMD5Q16401 504 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 WDR72Q3MJ13 1102 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 SV2CQ496J9 727 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 WSCD1Q658N2 575 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 C15orf39Q6ZRI6 1047 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 VN1R2Q8NFZ6 395 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PRDM6Q9NQX0 595 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
SYPL1-201ENST00000011473 IRAK3Q9Y616 596 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 A0A0C4DFX4 3053 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 HCRTO43612 131 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 HLA-DRAP01903 254 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 SPATA31D3P0C874 917 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 ODC1P11926 461 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PNPLA4P41247 253 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 MXI1P50539 228 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 YWHAHQ04917 246 aaPredicted RBP12.95□□□□□ -0.34
SYPL1-201ENST00000011473 MYO1EQ12965 1108 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 KRT39Q6A163 491 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PDE12Q6L8Q7 609 aaKnown RBP12.95□□□□□ -0.34
SYPL1-201ENST00000011473 SPATA31D4Q6ZUB0 917 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 TRIM59Q8IWR1 403 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 SEMA4DQ92854 862 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 KLHL5Q96PQ7 755 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 CLSTN3Q9BQT9 956 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 METTL14Q9HCE5 456 aaKnown RBP12.95□□□□□ -0.34
SYPL1-201ENST00000011473 TMEM8AQ9HCN3 771 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 STK39Q9UEW8 545 aa12.95□□□□□ -0.34
SYPL1-201ENST00000011473 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms