RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-222	ENST00000641321	MLLT3	P42568	568 aa	Predicted RBP	11.94	□□□□□ -0.5
CASC19-222	ENST00000641321	ZPR1	O75312	459 aa		11.93	□□□□□ -0.5
CASC19-222	ENST00000641321	PCDHB3	Q9Y5E6	796 aa		11.92	□□□□□ -0.5
CASC19-222	ENST00000641321	PTGDR	Q13258	359 aa		11.91	□□□□□ -0.5
CASC19-222	ENST00000641321	RBM46	Q8TBY0	533 aa	Known RBP	11.9	□□□□□ -0.5
CASC19-222	ENST00000641321	PDZRN3	Q9UPQ7	1066 aa		11.9	□□□□□ -0.5
CASC19-222	ENST00000641321	DNAJB2	P25686	324 aa		11.89	□□□□□ -0.51
CASC19-222	ENST00000641321	KCNV2	Q8TDN2	545 aa		11.89	□□□□□ -0.51
CASC19-222	ENST00000641321	TSHZ2	Q9NRE2	1034 aa		11.88	□□□□□ -0.51
CASC19-222	ENST00000641321	CC2D2A	Q9P2K1	1620 aa		11.88	□□□□□ -0.51
CASC19-222	ENST00000641321	CECR2	Q9BXF3	1484 aa		11.88	□□□□□ -0.51
CASC19-222	ENST00000641321	KMT5B	Q4FZB7	885 aa		11.87	□□□□□ -0.51
CASC19-222	ENST00000641321	TMEM134	Q9H6X4	195 aa		11.87	□□□□□ -0.51
CASC19-222	ENST00000641321	ADGRG1	Q9Y653	693 aa		11.86	□□□□□ -0.51
CASC19-222	ENST00000641321	SHROOM4	Q9ULL8	1493 aa		11.84	□□□□□ -0.51
CASC19-222	ENST00000641321	BLOC1S3	Q6QNY0	202 aa		11.84	□□□□□ -0.51
CASC19-222	ENST00000641321	NUTM2F	A1L443	756 aa		11.83	□□□□□ -0.52
CASC19-222	ENST00000641321	RNF223	E7ERA6	249 aa		11.82	□□□□□ -0.52
CASC19-222	ENST00000641321	RCCD1	A6NED2	376 aa		11.81	□□□□□ -0.52
CASC19-222	ENST00000641321	ACTN4	O43707	911 aa	Known RBP	11.81	□□□□□ -0.52
CASC19-222	ENST00000641321	P3H3	Q8IVL6	736 aa		11.81	□□□□□ -0.52
CASC19-222	ENST00000641321	SLC19A1	P41440	591 aa		11.79	□□□□□ -0.52
CASC19-222	ENST00000641321	EMID1	Q96A84	441 aa	Predicted RBP	11.79	□□□□□ -0.52
CASC19-222	ENST00000641321	MYO15B	Q96JP2	1530 aa		11.79	□□□□□ -0.52
CASC19-222	ENST00000641321	TRIM67	Q6ZTA4	783 aa		11.78	□□□□□ -0.52
CASC19-222	ENST00000641321	CFH	P08603	1231 aa		11.77	□□□□□ -0.53
CASC19-222	ENST00000641321	RSPH4A	Q5TD94	716 aa		11.77	□□□□□ -0.53
CASC19-222	ENST00000641321	ZNF787	Q6DD87	383 aa		11.77	□□□□□ -0.53
CASC19-222	ENST00000641321	ANKLE1	Q8NAG6	615 aa		11.77	□□□□□ -0.53
CASC19-222	ENST00000641321	TLL1	O43897	1013 aa		11.76	□□□□□ -0.53
CASC19-222	ENST00000641321	FCHSD2	O94868	740 aa		11.76	□□□□□ -0.53
CASC19-222	ENST00000641321	FAM161A	Q3B820	660 aa		11.76	□□□□□ -0.53
CASC19-222	ENST00000641321	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.75	□□□□□ -0.53
CASC19-222	ENST00000641321	NR1I2	O75469	434 aa		11.75	□□□□□ -0.53
CASC19-222	ENST00000641321	SLC10A3	P09131	477 aa		11.75	□□□□□ -0.53
CASC19-222	ENST00000641321	PKDCC	Q504Y2	493 aa		11.75	□□□□□ -0.53
CASC19-222	ENST00000641321	SPRYD7	Q5W111	196 aa		11.75	□□□□□ -0.53
CASC19-222	ENST00000641321	ZNF598	Q86UK7	904 aa	Known RBP	11.73	□□□□□ -0.53
CASC19-222	ENST00000641321	EIF4G1	Q04637	1599 aa	Known RBP	11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	S1PR4	O95977	384 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	OAT	P04181	439 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	PRR20E	P86478	221 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	PRR20C	P86479	221 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	PRR20D	P86480	221 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	PRR20B	P86481	221 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	PRR20A	P86496	221 aa		11.72	□□□□□ -0.53
CASC19-222	ENST00000641321	PXYLP1	Q8TE99	480 aa		11.71	□□□□□ -0.53
CASC19-222	ENST00000641321	PPEF1	O14829	653 aa	Predicted RBP	11.7	□□□□□ -0.54
CASC19-222	ENST00000641321	SEMA3E	O15041	775 aa		11.7	□□□□□ -0.54
CASC19-222	ENST00000641321	ADH1B	P00325	375 aa		11.7	□□□□□ -0.54
CASC19-222	ENST00000641321	LIAT1	Q6ZQX7	453 aa		11.69	□□□□□ -0.54
CASC19-222	ENST00000641321	SLC6A16	Q9GZN6	736 aa		11.68	□□□□□ -0.54
CASC19-222	ENST00000641321	DGAT1	O75907	488 aa		11.67	□□□□□ -0.54
CASC19-222	ENST00000641321	HIC1	Q14526	733 aa		11.67	□□□□□ -0.54
CASC19-222	ENST00000641321	ZNF697	Q5TEC3	545 aa		11.67	□□□□□ -0.54
CASC19-222	ENST00000641321	SCUBE3	Q8IX30	993 aa		11.66	□□□□□ -0.54
CASC19-222	ENST00000641321	SMYD5	Q6GMV2	418 aa		11.65	□□□□□ -0.54
CASC19-222	ENST00000641321	METTL3	Q86U44	580 aa	Known RBP	11.65	□□□□□ -0.54
CASC19-222	ENST00000641321	GDF9	O60383	454 aa		11.64	□□□□□ -0.55
CASC19-222	ENST00000641321	MYT1	Q01538	1121 aa		11.64	□□□□□ -0.55
CASC19-222	ENST00000641321	FAM187A	A6NFU0	413 aa		11.62	□□□□□ -0.55
CASC19-222	ENST00000641321	PLA2G2C	Q5R387	149 aa		11.62	□□□□□ -0.55
CASC19-222	ENST00000641321	ZNF775	Q96BV0	537 aa	Predicted RBP	11.61	□□□□□ -0.55
CASC19-222	ENST00000641321	CUX2	O14529	1486 aa		11.61	□□□□□ -0.55
CASC19-222	ENST00000641321	TESPA1	A2RU30	521 aa	Predicted RBP	11.6	□□□□□ -0.55
CASC19-222	ENST00000641321	RDH13	Q8NBN7	331 aa		11.6	□□□□□ -0.55
CASC19-222	ENST00000641321	SPSB2	Q99619	263 aa		11.6	□□□□□ -0.55
CASC19-222	ENST00000641321	PUS10	Q3MIT2	529 aa	Known RBP	11.59	□□□□□ -0.55
CASC19-222	ENST00000641321	TNFRSF10A	O00220	468 aa		11.58	□□□□□ -0.56
CASC19-222	ENST00000641321	DAXX	Q9UER7	740 aa	Predicted RBP	11.58	□□□□□ -0.56
CASC19-222	ENST00000641321	GNPAT	O15228	680 aa		11.57	□□□□□ -0.56
CASC19-222	ENST00000641321	RBM26	Q5T8P6	1007 aa	Known RBP	11.57	□□□□□ -0.56
CASC19-222	ENST00000641321	LMOD2	Q6P5Q4	547 aa		11.56	□□□□□ -0.56
CASC19-222	ENST00000641321	GPR37	O15354	613 aa		11.55	□□□□□ -0.56
CASC19-222	ENST00000641321	FECH	P22830	423 aa		11.55	□□□□□ -0.56
CASC19-222	ENST00000641321	MORN1	Q5T089	497 aa		11.55	□□□□□ -0.56
CASC19-222	ENST00000641321	SULF1	Q8IWU6	871 aa		11.54	□□□□□ -0.56
CASC19-222	ENST00000641321	THAP11	Q96EK4	314 aa		11.54	□□□□□ -0.56
CASC19-222	ENST00000641321	FOXC1	Q12948	553 aa		11.53	□□□□□ -0.56
CASC19-222	ENST00000641321	PKD2L1	Q9P0L9	805 aa		11.53	□□□□□ -0.56
CASC19-222	ENST00000641321	DDX11L8	A8MPP1	907 aa		11.52	□□□□□ -0.57
CASC19-222	ENST00000641321	POTEC	B2RU33	542 aa		11.52	□□□□□ -0.57
CASC19-222	ENST00000641321	RPIA	P49247	311 aa		11.52	□□□□□ -0.57
CASC19-222	ENST00000641321	CD2BP2	O95400	341 aa	Known RBP	11.51	□□□□□ -0.57
CASC19-222	ENST00000641321	FMNL1	O95466	1100 aa	Predicted RBP	11.51	□□□□□ -0.57
CASC19-222	ENST00000641321	ATP6V1A	P38606	617 aa		11.51	□□□□□ -0.57
CASC19-222	ENST00000641321	FUT2	Q10981	343 aa		11.51	□□□□□ -0.57
CASC19-222	ENST00000641321	SALL2	Q9Y467	1007 aa	Predicted RBP	11.5	□□□□□ -0.57
CASC19-222	ENST00000641321	GCGR	P47871	477 aa		11.49	□□□□□ -0.57
CASC19-222	ENST00000641321	GRIPAP1	Q4V328	841 aa		11.49	□□□□□ -0.57
CASC19-222	ENST00000641321	AAAS	Q9NRG9	546 aa		11.49	□□□□□ -0.57
CASC19-222	ENST00000641321	ZBTB24	O43167	697 aa	Predicted RBP	11.48	□□□□□ -0.57
CASC19-222	ENST00000641321	FAM160A2	Q8N612	972 aa	Predicted RBP	11.48	□□□□□ -0.57
CASC19-222	ENST00000641321	SLC27A5	Q9Y2P5	690 aa		11.48	□□□□□ -0.57
CASC19-222	ENST00000641321	FCF1	Q9Y324	198 aa	Known RBP	11.48	□□□□□ -0.57
CASC19-222	ENST00000641321	SCRIB	Q14160	1630 aa		11.47	□□□□□ -0.57
CASC19-222	ENST00000641321	CYP4X1	Q8N118	509 aa		11.46	□□□□□ -0.57
CASC19-222	ENST00000641321	CRIPAK	Q8N1N5	446 aa		11.46	□□□□□ -0.57
CASC19-222	ENST00000641321	NLRP7	Q8WX94	980 aa		11.46	□□□□□ -0.57
CASC19-222	ENST00000641321	PHOX2B	Q99453	314 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms