RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 KIF3BO15066 747 aa11.63□□□□□ -0.55
SCARB2-220ENST00000640076 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
SCARB2-220ENST00000640076 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
SCARB2-220ENST00000640076 MROH1Q8NDA8 1641 aa11.61□□□□□ -0.55
SCARB2-220ENST00000640076 IQGAP3Q86VI3 1631 aa11.61□□□□□ -0.55
SCARB2-220ENST00000640076 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
SCARB2-220ENST00000640076 PRDM15P57071 1507 aaPredicted RBP11.6□□□□□ -0.55
SCARB2-220ENST00000640076 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
SCARB2-220ENST00000640076 AGLP35573 1532 aa11.6□□□□□ -0.55
SCARB2-220ENST00000640076 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
SCARB2-220ENST00000640076 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
SCARB2-220ENST00000640076 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
SCARB2-220ENST00000640076 SIGLEC1Q9BZZ2 1709 aa11.59□□□□□ -0.55
SCARB2-220ENST00000640076 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-220ENST00000640076 KANK1Q14678 1352 aa11.57□□□□□ -0.56
SCARB2-220ENST00000640076 GGT6Q6P531 493 aa11.56□□□□□ -0.56
SCARB2-220ENST00000640076 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
SCARB2-220ENST00000640076 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
SCARB2-220ENST00000640076 POLA2Q14181 598 aa11.55□□□□□ -0.56
SCARB2-220ENST00000640076 TET3O43151 1660 aa11.55□□□□□ -0.56
SCARB2-220ENST00000640076 LMTK2Q8IWU2 1503 aa11.55□□□□□ -0.56
SCARB2-220ENST00000640076 STK25O00506 426 aa11.54□□□□□ -0.56
SCARB2-220ENST00000640076 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
SCARB2-220ENST00000640076 CEP152O94986 1710 aa11.54□□□□□ -0.56
SCARB2-220ENST00000640076 ABCC3O15438 1527 aa11.53□□□□□ -0.56
SCARB2-220ENST00000640076 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
SCARB2-220ENST00000640076 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
SCARB2-220ENST00000640076 ZC3H13Q5T200 1668 aaKnown RBP11.52□□□□□ -0.56
SCARB2-220ENST00000640076 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.56
SCARB2-220ENST00000640076 E9PCH4 1651 aa11.52□□□□□ -0.57
SCARB2-220ENST00000640076 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.57
SCARB2-220ENST00000640076 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-220ENST00000640076 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-220ENST00000640076 SIN3AQ96ST3 1273 aa11.5□□□□□ -0.57
SCARB2-220ENST00000640076 CAMSAP1Q5T5Y3 1602 aa11.5□□□□□ -0.57
SCARB2-220ENST00000640076 MLECQ14165 292 aa11.49□□□□□ -0.57
SCARB2-220ENST00000640076 PLA2R1Q13018 1463 aa11.49□□□□□ -0.57
SCARB2-220ENST00000640076 NECTIN2Q92692 538 aa11.48□□□□□ -0.57
SCARB2-220ENST00000640076 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
SCARB2-220ENST00000640076 NPATQ14207 1427 aa11.48□□□□□ -0.57
SCARB2-220ENST00000640076 GSE1Q14687 1217 aa11.48□□□□□ -0.57
SCARB2-220ENST00000640076 CLTCQ00610 1675 aaKnown RBP11.47□□□□□ -0.57
SCARB2-220ENST00000640076 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
SCARB2-220ENST00000640076 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
SCARB2-220ENST00000640076 PTPRTO14522 1441 aa11.47□□□□□ -0.57
SCARB2-220ENST00000640076 ARHGAP31Q2M1Z3 1444 aa11.47□□□□□ -0.57
SCARB2-220ENST00000640076 SPHKAPQ2M3C7 1700 aa11.47□□□□□ -0.57
SCARB2-220ENST00000640076 ZMYND10O75800 440 aa11.47□□□□□ -0.57
SCARB2-220ENST00000640076 CFAP65Q6ZU64 1925 aaKnown RBP11.46□□□□□ -0.58
SCARB2-220ENST00000640076 TRPM2O94759 1503 aa11.45□□□□□ -0.58
SCARB2-220ENST00000640076 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
SCARB2-220ENST00000640076 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
SCARB2-220ENST00000640076 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-220ENST00000640076 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
SCARB2-220ENST00000640076 FER1L4A9Z1Z3 1794 aa11.43□□□□□ -0.58
SCARB2-220ENST00000640076 NOS1P29475 1434 aa11.43□□□□□ -0.58
SCARB2-220ENST00000640076 MROH2AA6NES4 1674 aa11.43□□□□□ -0.58
SCARB2-220ENST00000640076 PREX1Q8TCU6 1659 aa11.42□□□□□ -0.58
SCARB2-220ENST00000640076 APBB1O00213 710 aa11.42□□□□□ -0.58
SCARB2-220ENST00000640076 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
SCARB2-220ENST00000640076 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
SCARB2-220ENST00000640076 ZMYM3Q14202 1370 aa11.42□□□□□ -0.58
SCARB2-220ENST00000640076 TONSLQ96HA7 1378 aa11.42□□□□□ -0.58
SCARB2-220ENST00000640076 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
SCARB2-220ENST00000640076 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
SCARB2-220ENST00000640076 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
SCARB2-220ENST00000640076 SYNMO15061 1565 aa11.4□□□□□ -0.58
SCARB2-220ENST00000640076 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
SCARB2-220ENST00000640076 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
SCARB2-220ENST00000640076 ZBTB12Q9Y330 459 aaPredicted RBP11.4□□□□□ -0.58
SCARB2-220ENST00000640076 ADAMTSL3P82987 1691 aa11.4□□□□□ -0.58
SCARB2-220ENST00000640076 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-220ENST00000640076 FBXO31Q5XUX0 539 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-220ENST00000640076 MADDQ8WXG6 1647 aa11.39□□□□□ -0.59
SCARB2-220ENST00000640076 SPATA31D1Q6ZQQ2 1576 aa11.39□□□□□ -0.59
SCARB2-220ENST00000640076 PIK3C2BO00750 1634 aa11.39□□□□□ -0.59
SCARB2-220ENST00000640076 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-220ENST00000640076 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
SCARB2-220ENST00000640076 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
SCARB2-220ENST00000640076 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
SCARB2-220ENST00000640076 C3P01024 1663 aa11.37□□□□□ -0.59
SCARB2-220ENST00000640076 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
SCARB2-220ENST00000640076 RIMS1Q86UR5 1692 aaKnown RBP11.37□□□□□ -0.59
SCARB2-220ENST00000640076 KIF1BO60333 1816 aa11.37□□□□□ -0.59
SCARB2-220ENST00000640076 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-220ENST00000640076 NEURL4Q96JN8 1562 aa11.36□□□□□ -0.59
SCARB2-220ENST00000640076 SEMA3EO15041 775 aa11.36□□□□□ -0.59
SCARB2-220ENST00000640076 SLC52A1Q9NWF4 448 aa11.36□□□□□ -0.59
SCARB2-220ENST00000640076 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
SCARB2-220ENST00000640076 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
SCARB2-220ENST00000640076 IDI1Q13907 227 aa11.35□□□□□ -0.59
SCARB2-220ENST00000640076 BARGINQ6ZT62 677 aa11.35□□□□□ -0.59
SCARB2-220ENST00000640076 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
SCARB2-220ENST00000640076 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
SCARB2-220ENST00000640076 TNRQ92752 1358 aa11.34□□□□□ -0.59
SCARB2-220ENST00000640076 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
SCARB2-220ENST00000640076 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
SCARB2-220ENST00000640076 TMEM131LA2VDJ0 1609 aa11.32□□□□□ -0.6
SCARB2-220ENST00000640076 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
SCARB2-220ENST00000640076 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms