RNA–Protein interactions for RNA: ENST00000640038.1

PAX6-263, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-263ENST00000640038 KCNA6P17658 529 aa13.57□□□□□ -0.24
PAX6-263ENST00000640038 MSH6P52701 1360 aa13.57□□□□□ -0.24
PAX6-263ENST00000640038 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
PAX6-263ENST00000640038 BCANQ96GW7 911 aa13.55□□□□□ -0.24
PAX6-263ENST00000640038 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
PAX6-263ENST00000640038 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
PAX6-263ENST00000640038 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
PAX6-263ENST00000640038 AFF2P51816 1311 aa13.54□□□□□ -0.24
PAX6-263ENST00000640038 VPS8Q8N3P4 1428 aa13.54□□□□□ -0.24
PAX6-263ENST00000640038 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
PAX6-263ENST00000640038 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
PAX6-263ENST00000640038 ERVK-7P63135 1459 aa13.53□□□□□ -0.24
PAX6-263ENST00000640038 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
PAX6-263ENST00000640038 MBD5Q9P267 1494 aa13.52□□□□□ -0.25
PAX6-263ENST00000640038 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
PAX6-263ENST00000640038 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
PAX6-263ENST00000640038 SLIT1O75093 1534 aa13.5□□□□□ -0.25
PAX6-263ENST00000640038 ARHGAP23Q9P227 1491 aa13.5□□□□□ -0.25
PAX6-263ENST00000640038 RGS12O14924 1447 aa13.5□□□□□ -0.25
PAX6-263ENST00000640038 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
PAX6-263ENST00000640038 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
PAX6-263ENST00000640038 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
PAX6-263ENST00000640038 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
PAX6-263ENST00000640038 ABCC3O15438 1527 aa13.49□□□□□ -0.25
PAX6-263ENST00000640038 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
PAX6-263ENST00000640038 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
PAX6-263ENST00000640038 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
PAX6-263ENST00000640038 CEP152O94986 1710 aa13.47□□□□□ -0.25
PAX6-263ENST00000640038 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
PAX6-263ENST00000640038 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
PAX6-263ENST00000640038 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
PAX6-263ENST00000640038 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
PAX6-263ENST00000640038 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
PAX6-263ENST00000640038 TSPY4P0CV99 314 aa13.46□□□□□ -0.25
PAX6-263ENST00000640038 TSPY10P0CW01 314 aa13.46□□□□□ -0.25
PAX6-263ENST00000640038 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
PAX6-263ENST00000640038 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
PAX6-263ENST00000640038 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
PAX6-263ENST00000640038 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
PAX6-263ENST00000640038 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
PAX6-263ENST00000640038 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
PAX6-263ENST00000640038 KDM5AP29375 1690 aaKnown RBP13.43□□□□□ -0.26
PAX6-263ENST00000640038 ATF3P18847 181 aa13.42□□□□□ -0.26
PAX6-263ENST00000640038 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
PAX6-263ENST00000640038 TET3O43151 1660 aa13.4□□□□□ -0.26
PAX6-263ENST00000640038 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.26
PAX6-263ENST00000640038 RTL5Q5HYW3 569 aaPredicted RBP13.4□□□□□ -0.26
PAX6-263ENST00000640038 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
PAX6-263ENST00000640038 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
PAX6-263ENST00000640038 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
PAX6-263ENST00000640038 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
PAX6-263ENST00000640038 CAMSAP2Q08AD1 1489 aa13.38□□□□□ -0.27
PAX6-263ENST00000640038 ADAMTS2O95450 1211 aa13.38□□□□□ -0.27
PAX6-263ENST00000640038 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
PAX6-263ENST00000640038 CHD2O14647 1828 aaKnown RBP13.38□□□□□ -0.27
PAX6-263ENST00000640038 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
PAX6-263ENST00000640038 IDI1Q13907 227 aa13.37□□□□□ -0.27
PAX6-263ENST00000640038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
PAX6-263ENST00000640038 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
PAX6-263ENST00000640038 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
PAX6-263ENST00000640038 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
PAX6-263ENST00000640038 ITGAEP38570 1179 aa13.36□□□□□ -0.27
PAX6-263ENST00000640038 BRINP3Q76B58 766 aa13.36□□□□□ -0.27
PAX6-263ENST00000640038 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
PAX6-263ENST00000640038 C19orf44Q9H6X5 657 aa13.36□□□□□ -0.27
PAX6-263ENST00000640038 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
PAX6-263ENST00000640038 PPP1R15AO75807 674 aaPredicted RBP13.35□□□□□ -0.27
PAX6-263ENST00000640038 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
PAX6-263ENST00000640038 EP400Q96L91 3159 aa13.34□□□□□ -0.27
PAX6-263ENST00000640038 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
PAX6-263ENST00000640038 USP21Q9UK80 565 aa13.34□□□□□ -0.27
PAX6-263ENST00000640038 EIF2AK4Q9P2K8 1649 aaKnown RBP13.33□□□□□ -0.28
PAX6-263ENST00000640038 TRPC5Q9UL62 973 aaPredicted RBP13.33□□□□□ -0.28
PAX6-263ENST00000640038 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
PAX6-263ENST00000640038 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
PAX6-263ENST00000640038 ARHGAP31Q2M1Z3 1444 aa13.31□□□□□ -0.28
PAX6-263ENST00000640038 MAST1Q9Y2H9 1570 aa13.31□□□□□ -0.28
PAX6-263ENST00000640038 EHBP1L1Q8N3D4 1523 aa13.3□□□□□ -0.28
PAX6-263ENST00000640038 ARHGEF5Q12774 1597 aa13.3□□□□□ -0.28
PAX6-263ENST00000640038 ANP32CO43423 234 aa13.3□□□□□ -0.28
PAX6-263ENST00000640038 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
PAX6-263ENST00000640038 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
PAX6-263ENST00000640038 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
PAX6-263ENST00000640038 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
PAX6-263ENST00000640038 CCDC136Q96JN2 1154 aa13.28□□□□□ -0.28
PAX6-263ENST00000640038 LRP5O75197 1615 aa13.28□□□□□ -0.28
PAX6-263ENST00000640038 YY1P25490 414 aa13.27□□□□□ -0.29
PAX6-263ENST00000640038 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
PAX6-263ENST00000640038 SF3B2Q13435 895 aaKnown RBP13.27□□□□□ -0.29
PAX6-263ENST00000640038 PKNOX2Q96KN3 472 aa13.27□□□□□ -0.29
PAX6-263ENST00000640038 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.29
PAX6-263ENST00000640038 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.29
PAX6-263ENST00000640038 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.29
PAX6-263ENST00000640038 MYO5BQ9ULV0 1848 aa13.27□□□□□ -0.29
PAX6-263ENST00000640038 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
PAX6-263ENST00000640038 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
PAX6-263ENST00000640038 ADGRB3O60242 1522 aa13.25□□□□□ -0.29
PAX6-263ENST00000640038 KANK1Q14678 1352 aa13.25□□□□□ -0.29
PAX6-263ENST00000640038 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
PAX6-263ENST00000640038 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms