RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
CROCCP2-204ENST00000639456 GOLGA2Q08379 1002 aa23.49■■□□□ 1.35
CROCCP2-204ENST00000639456 CLTCL1P53675 1640 aa23.49■■□□□ 1.35
CROCCP2-204ENST00000639456 SCAF11Q99590 1463 aaKnown RBP23.48■■□□□ 1.35
CROCCP2-204ENST00000639456 RTL5Q5HYW3 569 aaPredicted RBP23.48■■□□□ 1.35
CROCCP2-204ENST00000639456 IQGAP1P46940 1657 aa23.48■■□□□ 1.35
CROCCP2-204ENST00000639456 APAF1O14727 1248 aa23.47■■□□□ 1.35
CROCCP2-204ENST00000639456 UGGT1Q9NYU2 1555 aa23.47■■□□□ 1.35
CROCCP2-204ENST00000639456 ADGRF5Q8IZF2 1346 aa23.47■■□□□ 1.35
CROCCP2-204ENST00000639456 CDCA8Q53HL2 280 aa23.46■■□□□ 1.35
CROCCP2-204ENST00000639456 MS4A1P11836 297 aa23.46■■□□□ 1.35
CROCCP2-204ENST00000639456 TRPM2O94759 1503 aa23.45■■□□□ 1.34
CROCCP2-204ENST00000639456 SCAPERQ9BY12 1400 aa23.44■■□□□ 1.34
CROCCP2-204ENST00000639456 ZFYVE16Q7Z3T8 1539 aa23.44■■□□□ 1.34
CROCCP2-204ENST00000639456 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
CROCCP2-204ENST00000639456 ZNF521Q96K83 1311 aa23.44■■□□□ 1.34
CROCCP2-204ENST00000639456 INSRP06213 1382 aa23.43■■□□□ 1.34
CROCCP2-204ENST00000639456 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
CROCCP2-204ENST00000639456 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
CROCCP2-204ENST00000639456 DMRT2Q9Y5R5 561 aa23.43■■□□□ 1.34
CROCCP2-204ENST00000639456 CARD14Q9BXL6 1004 aa23.42■■□□□ 1.34
CROCCP2-204ENST00000639456 TNNT2P45379 298 aaPredicted RBP23.42■■□□□ 1.34
CROCCP2-204ENST00000639456 PTPRTO14522 1441 aa23.41■■□□□ 1.34
CROCCP2-204ENST00000639456 CEP152O94986 1710 aa23.41■■□□□ 1.34
CROCCP2-204ENST00000639456 BCAR3O75815 825 aa23.41■■□□□ 1.34
CROCCP2-204ENST00000639456 SLC4A3P48751 1232 aa23.41■■□□□ 1.34
CROCCP2-204ENST00000639456 SLFN5Q08AF3 891 aa23.41■■□□□ 1.34
CROCCP2-204ENST00000639456 KDM2BQ8NHM5 1336 aa23.39■■□□□ 1.34
CROCCP2-204ENST00000639456 SYNMO15061 1565 aa23.39■■□□□ 1.34
CROCCP2-204ENST00000639456 KANK1Q14678 1352 aa23.39■■□□□ 1.33
CROCCP2-204ENST00000639456 MYOM1P52179 1685 aa23.39■■□□□ 1.33
CROCCP2-204ENST00000639456 RGS3P49796 1198 aa23.39■■□□□ 1.33
CROCCP2-204ENST00000639456 NEFMP07197 916 aa23.37■■□□□ 1.33
CROCCP2-204ENST00000639456 FANCAO15360 1455 aa23.37■■□□□ 1.33
CROCCP2-204ENST00000639456 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
CROCCP2-204ENST00000639456 RTEL1-TNFRSF6BF6WH68 1400 aa23.37■■□□□ 1.33
CROCCP2-204ENST00000639456 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
CROCCP2-204ENST00000639456 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
CROCCP2-204ENST00000639456 ATP7AQ04656 1500 aa23.34■■□□□ 1.33
CROCCP2-204ENST00000639456 CFAP65Q6ZU64 1925 aaKnown RBP23.34■■□□□ 1.33
CROCCP2-204ENST00000639456 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
CROCCP2-204ENST00000639456 TRAK1Q9UPV9 953 aa23.34■■□□□ 1.33
CROCCP2-204ENST00000639456 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
CROCCP2-204ENST00000639456 ERVK-7P63135 1459 aa23.33■■□□□ 1.32
CROCCP2-204ENST00000639456 CENPQQ7L2Z9 268 aaPredicted RBP23.33■■□□□ 1.32
CROCCP2-204ENST00000639456 TET3O43151 1660 aa23.32■■□□□ 1.32
CROCCP2-204ENST00000639456 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.32■■□□□ 1.32
CROCCP2-204ENST00000639456 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
CROCCP2-204ENST00000639456 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
CROCCP2-204ENST00000639456 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
CROCCP2-204ENST00000639456 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
CROCCP2-204ENST00000639456 ADGRL1O94910 1474 aa23.3■■□□□ 1.32
CROCCP2-204ENST00000639456 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
CROCCP2-204ENST00000639456 STAC3Q96MF2 364 aa23.3■■□□□ 1.32
CROCCP2-204ENST00000639456 TRMT2AQ8IZ69 625 aaKnown RBP23.29■■□□□ 1.32
CROCCP2-204ENST00000639456 SLC12A5Q9H2X9 1139 aa23.29■■□□□ 1.32
CROCCP2-204ENST00000639456 ABCA6Q8N139 1617 aa23.28■■□□□ 1.32
CROCCP2-204ENST00000639456 C8orf34Q49A92 452 aa23.27■■□□□ 1.32
CROCCP2-204ENST00000639456 GGT6Q6P531 493 aa23.27■■□□□ 1.32
CROCCP2-204ENST00000639456 NKTRP30414 1462 aaKnown RBP23.25■■□□□ 1.31
CROCCP2-204ENST00000639456 MAP3K4Q9Y6R4 1608 aa23.25■■□□□ 1.31
CROCCP2-204ENST00000639456 NPC1L1Q9UHC9 1359 aa23.25■■□□□ 1.31
CROCCP2-204ENST00000639456 NOS1P29475 1434 aa23.25■■□□□ 1.31
CROCCP2-204ENST00000639456 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
CROCCP2-204ENST00000639456 E9PSI1 815 aa23.24■■□□□ 1.31
CROCCP2-204ENST00000639456 IGHDP01880 384 aa23.24■■□□□ 1.31
CROCCP2-204ENST00000639456 PANK1Q8TE04 598 aa23.24■■□□□ 1.31
CROCCP2-204ENST00000639456 MROH1Q8NDA8 1641 aa23.23■■□□□ 1.31
CROCCP2-204ENST00000639456 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
CROCCP2-204ENST00000639456 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
CROCCP2-204ENST00000639456 FRAT1Q92837 279 aaPredicted RBP23.23■■□□□ 1.31
CROCCP2-204ENST00000639456 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
CROCCP2-204ENST00000639456 MORC1Q86VD1 984 aa23.22■■□□□ 1.31
CROCCP2-204ENST00000639456 WWC1Q8IX03 1113 aa23.22■■□□□ 1.31
CROCCP2-204ENST00000639456 COG6Q9Y2V7 657 aa23.22■■□□□ 1.31
CROCCP2-204ENST00000639456 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
CROCCP2-204ENST00000639456 CANXP27824 592 aaKnown RBP23.21■■□□□ 1.31
CROCCP2-204ENST00000639456 KIF1BO60333 1816 aa23.2■■□□□ 1.3
CROCCP2-204ENST00000639456 DDRGK1Q96HY6 314 aa23.2■■□□□ 1.3
CROCCP2-204ENST00000639456 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
CROCCP2-204ENST00000639456 ABCA9Q8IUA7 1624 aa23.2■■□□□ 1.3
CROCCP2-204ENST00000639456 NSD3Q9BZ95 1437 aa23.2■■□□□ 1.3
CROCCP2-204ENST00000639456 ARAP3Q8WWN8 1544 aa23.19■■□□□ 1.3
CROCCP2-204ENST00000639456 SAFB2Q14151 953 aaKnown RBP eCLIP23.18■■□□□ 1.3
CROCCP2-204ENST00000639456 KIAA1210Q9ULL0 1709 aa23.17■■□□□ 1.3
CROCCP2-204ENST00000639456 DAXXQ9UER7 740 aaPredicted RBP23.17■■□□□ 1.3
CROCCP2-204ENST00000639456 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
CROCCP2-204ENST00000639456 PPRC1Q5VV67 1664 aaKnown RBP23.17■■□□□ 1.3
CROCCP2-204ENST00000639456 MYOM2P54296 1465 aa23.16■■□□□ 1.3
CROCCP2-204ENST00000639456 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
CROCCP2-204ENST00000639456 EFCAB6Q5THR3 1501 aa23.15■■□□□ 1.3
CROCCP2-204ENST00000639456 PPM1GO15355 546 aaPredicted RBP23.15■■□□□ 1.3
CROCCP2-204ENST00000639456 TCP11L2Q8N4U5 519 aa23.15■■□□□ 1.3
CROCCP2-204ENST00000639456 MTHFSP49914 203 aa23.14■■□□□ 1.3
CROCCP2-204ENST00000639456 KIDINS220Q9ULH0 1771 aa23.13■■□□□ 1.29
CROCCP2-204ENST00000639456 CLUAP1Q96AJ1 413 aa23.12■■□□□ 1.29
CROCCP2-204ENST00000639456 NFKBIBQ15653 356 aa23.11■■□□□ 1.29
CROCCP2-204ENST00000639456 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
CROCCP2-204ENST00000639456 IL27Q8NEV9 243 aa23.11■■□□□ 1.29
CROCCP2-204ENST00000639456 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms