RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 PRAM1Q96QH2 718 aa11.74□□□□□ -0.53
CACNA1A-254ENST00000637952 ATF3P18847 181 aa11.74□□□□□ -0.53
CACNA1A-254ENST00000637952 RIMS2Q9UQ26 1411 aa11.73□□□□□ -0.53
CACNA1A-254ENST00000637952 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
CACNA1A-254ENST00000637952 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-254ENST00000637952 ZMYM4Q5VZL5 1548 aa11.73□□□□□ -0.53
CACNA1A-254ENST00000637952 PAK3O75914 559 aaPredicted RBP11.73□□□□□ -0.53
CACNA1A-254ENST00000637952 ABCC3O15438 1527 aa11.72□□□□□ -0.53
CACNA1A-254ENST00000637952 GCC2Q8IWJ2 1684 aa11.72□□□□□ -0.53
CACNA1A-254ENST00000637952 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-254ENST00000637952 NGDNQ8NEJ9 315 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-254ENST00000637952 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
CACNA1A-254ENST00000637952 KNSTRNQ9Y448 316 aa11.72□□□□□ -0.53
CACNA1A-254ENST00000637952 USP47Q96K76 1375 aa11.71□□□□□ -0.53
CACNA1A-254ENST00000637952 LTKP29376 864 aa11.71□□□□□ -0.53
CACNA1A-254ENST00000637952 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.54
CACNA1A-254ENST00000637952 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.54
CACNA1A-254ENST00000637952 AGLP35573 1532 aa11.71□□□□□ -0.54
CACNA1A-254ENST00000637952 RICTORQ6R327 1708 aa11.71□□□□□ -0.54
CACNA1A-254ENST00000637952 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
CACNA1A-254ENST00000637952 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
CACNA1A-254ENST00000637952 C14orf93Q9H972 538 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-254ENST00000637952 SOX12O15370 315 aa11.69□□□□□ -0.54
CACNA1A-254ENST00000637952 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-254ENST00000637952 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
CACNA1A-254ENST00000637952 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
CACNA1A-254ENST00000637952 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-254ENST00000637952 ARHGAP31Q2M1Z3 1444 aa11.68□□□□□ -0.54
CACNA1A-254ENST00000637952 PRDM15P57071 1507 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-254ENST00000637952 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-254ENST00000637952 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
CACNA1A-254ENST00000637952 CENPBP07199 599 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 TNNT2P45379 298 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 PPRC1Q5VV67 1664 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 UGGT1Q9NYU2 1555 aa11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 PTPRMP28827 1452 aa11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 FRMPD1Q5SYB0 1578 aa11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 TBX22Q9Y458 520 aa11.66□□□□□ -0.54
CACNA1A-254ENST00000637952 TERF2IPQ9NYB0 399 aa11.65□□□□□ -0.54
CACNA1A-254ENST00000637952 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
CACNA1A-254ENST00000637952 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 EFCAB6Q5THR3 1501 aa11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 CC2D1BQ5T0F9 858 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 PSME1Q06323 249 aa11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 CLTCQ00610 1675 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-254ENST00000637952 KCNA6P17658 529 aa11.63□□□□□ -0.55
CACNA1A-254ENST00000637952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
CACNA1A-254ENST00000637952 PMFBP1Q8TBY8 1022 aa11.63□□□□□ -0.55
CACNA1A-254ENST00000637952 PTPRTO14522 1441 aa11.63□□□□□ -0.55
CACNA1A-254ENST00000637952 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
CACNA1A-254ENST00000637952 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
CACNA1A-254ENST00000637952 TET3O43151 1660 aa11.62□□□□□ -0.55
CACNA1A-254ENST00000637952 CEP152O94986 1710 aa11.62□□□□□ -0.55
CACNA1A-254ENST00000637952 IQGAP3Q86VI3 1631 aa11.61□□□□□ -0.55
CACNA1A-254ENST00000637952 UNC13BO14795 1591 aa11.61□□□□□ -0.55
CACNA1A-254ENST00000637952 NEFMP07197 916 aa11.61□□□□□ -0.55
CACNA1A-254ENST00000637952 RIMS1Q86UR5 1692 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-254ENST00000637952 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
CACNA1A-254ENST00000637952 PANK3Q9H999 370 aa11.59□□□□□ -0.55
CACNA1A-254ENST00000637952 MADDQ8WXG6 1647 aa11.59□□□□□ -0.55
CACNA1A-254ENST00000637952 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
CACNA1A-254ENST00000637952 TRPM2O94759 1503 aa11.58□□□□□ -0.56
CACNA1A-254ENST00000637952 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
CACNA1A-254ENST00000637952 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
CACNA1A-254ENST00000637952 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
CACNA1A-254ENST00000637952 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
CACNA1A-254ENST00000637952 SLC12A5Q9H2X9 1139 aa11.58□□□□□ -0.56
CACNA1A-254ENST00000637952 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
CACNA1A-254ENST00000637952 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
CACNA1A-254ENST00000637952 NUDT16Q96DE0 195 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-254ENST00000637952 NPHP4O75161 1426 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-254ENST00000637952 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
CACNA1A-254ENST00000637952 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 NUTM2GQ5VZR2 741 aa11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-254ENST00000637952 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 REREQ9P2R6 1566 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 C19orf44Q9H6X5 657 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 MSH6P52701 1360 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 FOXO3O43524 673 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 MRS2Q9HD23 443 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 FER1L4A9Z1Z3 1794 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
CACNA1A-254ENST00000637952 E9PCH4 1651 aa11.54□□□□□ -0.56
CACNA1A-254ENST00000637952 TOM1O60784 492 aa11.54□□□□□ -0.56
CACNA1A-254ENST00000637952 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
CACNA1A-254ENST00000637952 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
CACNA1A-254ENST00000637952 ARXQ96QS3 562 aa11.54□□□□□ -0.56
CACNA1A-254ENST00000637952 ZNF335Q9H4Z2 1342 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-254ENST00000637952 GPRASP1Q5JY77 1395 aa11.53□□□□□ -0.56
CACNA1A-254ENST00000637952 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
CACNA1A-254ENST00000637952 YTHDC2Q9H6S0 1430 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-254ENST00000637952 LMTK3Q96Q04 1460 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms