RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 ATN1P54259 1190 aaPredicted RBP19■□□□□ 0.63
CACNA1A-244ENST00000637625 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
CACNA1A-244ENST00000637625 TTLL12Q14166 644 aaPredicted RBP18.99■□□□□ 0.63
CACNA1A-244ENST00000637625 PTGDRQ13258 359 aa18.99■□□□□ 0.63
CACNA1A-244ENST00000637625 APBB1O00213 710 aa18.98■□□□□ 0.63
CACNA1A-244ENST00000637625 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
CACNA1A-244ENST00000637625 GIGYF2Q6Y7W6 1299 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-244ENST00000637625 GOPCQ9HD26 462 aa18.97■□□□□ 0.63
CACNA1A-244ENST00000637625 PRG4Q92954 1404 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-244ENST00000637625 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
CACNA1A-244ENST00000637625 CCNB3Q8WWL7 1395 aa18.97■□□□□ 0.63
CACNA1A-244ENST00000637625 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-244ENST00000637625 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-244ENST00000637625 SHROOM2Q13796 1616 aa18.95■□□□□ 0.62
CACNA1A-244ENST00000637625 FLIIQ13045 1269 aa18.94■□□□□ 0.62
CACNA1A-244ENST00000637625 ITGAEP38570 1179 aa18.92■□□□□ 0.62
CACNA1A-244ENST00000637625 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
CACNA1A-244ENST00000637625 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
CACNA1A-244ENST00000637625 OCEL1Q9H607 264 aa18.92■□□□□ 0.62
CACNA1A-244ENST00000637625 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
CACNA1A-244ENST00000637625 CLASP1Q7Z460 1538 aa18.91■□□□□ 0.62
CACNA1A-244ENST00000637625 CCER1Q8TC90 406 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-244ENST00000637625 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-244ENST00000637625 ABCA8O94911 1581 aa18.87■□□□□ 0.61
CACNA1A-244ENST00000637625 EVI5O60447 810 aa18.86■□□□□ 0.61
CACNA1A-244ENST00000637625 CDHR5Q9HBB8 845 aa18.86■□□□□ 0.61
CACNA1A-244ENST00000637625 ATMINO43313 823 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-244ENST00000637625 FGD6Q6ZV73 1430 aa18.84■□□□□ 0.61
CACNA1A-244ENST00000637625 PHOX2BQ99453 314 aa18.84■□□□□ 0.61
CACNA1A-244ENST00000637625 NPDC1Q9NQX5 325 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-244ENST00000637625 TMUB1Q9BVT8 246 aa18.84■□□□□ 0.61
CACNA1A-244ENST00000637625 PTPRGP23470 1445 aa18.83■□□□□ 0.61
CACNA1A-244ENST00000637625 ARHGEF11O15085 1522 aa18.82■□□□□ 0.6
CACNA1A-244ENST00000637625 MYOM3Q5VTT5 1437 aa18.81■□□□□ 0.6
CACNA1A-244ENST00000637625 MCM6Q14566 821 aa18.79■□□□□ 0.6
CACNA1A-244ENST00000637625 ASTLQ6HA08 431 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-244ENST00000637625 IER5LQ5T953 404 aa18.78■□□□□ 0.6
CACNA1A-244ENST00000637625 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
CACNA1A-244ENST00000637625 A6NJR5 290 aa18.77■□□□□ 0.6
CACNA1A-244ENST00000637625 EVX2Q03828 476 aa18.77■□□□□ 0.6
CACNA1A-244ENST00000637625 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
CACNA1A-244ENST00000637625 TRAK2O60296 914 aa18.77■□□□□ 0.6
CACNA1A-244ENST00000637625 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-244ENST00000637625 KIF14Q15058 1648 aa18.76■□□□□ 0.59
CACNA1A-244ENST00000637625 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-244ENST00000637625 TBC1D12O60347 775 aa18.75■□□□□ 0.59
CACNA1A-244ENST00000637625 ATP10BO94823 1461 aa18.74■□□□□ 0.59
CACNA1A-244ENST00000637625 G3V3G9 751 aa18.74■□□□□ 0.59
CACNA1A-244ENST00000637625 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
CACNA1A-244ENST00000637625 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-244ENST00000637625 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-244ENST00000637625 UACAQ9BZF9 1416 aa18.72■□□□□ 0.59
CACNA1A-244ENST00000637625 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
CACNA1A-244ENST00000637625 MDM2Q00987 491 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-244ENST00000637625 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-244ENST00000637625 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-244ENST00000637625 PTCD2Q8WV60 388 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-244ENST00000637625 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
CACNA1A-244ENST00000637625 PLCG2P16885 1265 aa18.69■□□□□ 0.58
CACNA1A-244ENST00000637625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.68■□□□□ 0.58
CACNA1A-244ENST00000637625 COLQQ9Y215 455 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-244ENST00000637625 POM121Q96HA1 1249 aa18.67■□□□□ 0.58
CACNA1A-244ENST00000637625 GPCPD1Q9NPB8 672 aa18.67■□□□□ 0.58
CACNA1A-244ENST00000637625 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-244ENST00000637625 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
CACNA1A-244ENST00000637625 TSR1Q2NL82 804 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-244ENST00000637625 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
CACNA1A-244ENST00000637625 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-244ENST00000637625 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
CACNA1A-244ENST00000637625 PTPRKQ15262 1439 aa18.65■□□□□ 0.58
CACNA1A-244ENST00000637625 NLRP7Q8WX94 980 aa18.65■□□□□ 0.58
CACNA1A-244ENST00000637625 PLEKHD1A6NEE1 506 aa18.65■□□□□ 0.58
CACNA1A-244ENST00000637625 CLCN1P35523 988 aa18.65■□□□□ 0.58
CACNA1A-244ENST00000637625 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-244ENST00000637625 L3MBTL3Q96JM7 780 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-244ENST00000637625 MIA2Q96PC5 1412 aa18.64■□□□□ 0.57
CACNA1A-244ENST00000637625 ZCCHC11Q5TAX3 1644 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-244ENST00000637625 SETD5Q9C0A6 1442 aa18.62■□□□□ 0.57
CACNA1A-244ENST00000637625 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-244ENST00000637625 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
CACNA1A-244ENST00000637625 SKIV2LQ15477 1246 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-244ENST00000637625 MAP3K7O43318 606 aa18.6■□□□□ 0.57
CACNA1A-244ENST00000637625 FNBP4Q8N3X1 1017 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-244ENST00000637625 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-244ENST00000637625 BEGAINQ9BUH8 593 aa18.6■□□□□ 0.57
CACNA1A-244ENST00000637625 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-244ENST00000637625 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-244ENST00000637625 PCDHGA10Q9Y5H3 936 aa18.59■□□□□ 0.57
CACNA1A-244ENST00000637625 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-244ENST00000637625 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
CACNA1A-244ENST00000637625 NECTIN2Q92692 538 aa18.58■□□□□ 0.57
CACNA1A-244ENST00000637625 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
CACNA1A-244ENST00000637625 PHF14O94880 888 aa18.57■□□□□ 0.56
CACNA1A-244ENST00000637625 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
CACNA1A-244ENST00000637625 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-244ENST00000637625 FAM217BQ9NTX9 383 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-244ENST00000637625 POLR3EQ9NVU0 708 aa18.56■□□□□ 0.56
CACNA1A-244ENST00000637625 FBXO31Q5XUX0 539 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-244ENST00000637625 PROSER2Q86WR7 435 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-244ENST00000637625 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms