RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	TXNDC2	Q86VQ3	553 aa		10.21	□□□□□ -0.78
CACNB4-256	ENST00000637535	RGS17	Q9UGC6	210 aa	Predicted RBP	10.21	□□□□□ -0.78
CACNB4-256	ENST00000637535	MROH1	Q8NDA8	1641 aa		10.21	□□□□□ -0.78
CACNB4-256	ENST00000637535	ZC3H13	Q5T200	1668 aa	Known RBP	10.2	□□□□□ -0.78
CACNB4-256	ENST00000637535	RRP7BP	Q9NSQ0	103 aa		10.2	□□□□□ -0.78
CACNB4-256	ENST00000637535	UBR1	Q8IWV7	1749 aa		10.2	□□□□□ -0.78
CACNB4-256	ENST00000637535	LRRC9	Q6ZRR7	1453 aa		10.2	□□□□□ -0.78
CACNB4-256	ENST00000637535	RNF17	Q9BXT8	1623 aa	Known RBP	10.2	□□□□□ -0.78
CACNB4-256	ENST00000637535	XIRP1	Q702N8	1843 aa	Known RBP	10.19	□□□□□ -0.78
CACNB4-256	ENST00000637535	CHIC2	Q9UKJ5	165 aa		10.18	□□□□□ -0.78
CACNB4-256	ENST00000637535	SCAF11	Q99590	1463 aa	Known RBP	10.17	□□□□□ -0.78
CACNB4-256	ENST00000637535	MKRN4P	Q13434	485 aa	Predicted RBP	10.16	□□□□□ -0.78
CACNB4-256	ENST00000637535	SLC26A8	Q96RN1	970 aa		10.16	□□□□□ -0.78
CACNB4-256	ENST00000637535	STAG3	Q9UJ98	1225 aa		10.16	□□□□□ -0.78
CACNB4-256	ENST00000637535	MAST1	Q9Y2H9	1570 aa		10.16	□□□□□ -0.78
CACNB4-256	ENST00000637535	PIK3C2B	O00750	1634 aa		10.15	□□□□□ -0.78
CACNB4-256	ENST00000637535	VPS8	Q8N3P4	1428 aa		10.15	□□□□□ -0.78
CACNB4-256	ENST00000637535	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.15	□□□□□ -0.78
CACNB4-256	ENST00000637535	TSHZ2	Q9NRE2	1034 aa		10.15	□□□□□ -0.78
CACNB4-256	ENST00000637535	MYOM3	Q5VTT5	1437 aa		10.14	□□□□□ -0.79
CACNB4-256	ENST00000637535	SYNM	O15061	1565 aa		10.14	□□□□□ -0.79
CACNB4-256	ENST00000637535	POTEA	Q6S8J7	498 aa		10.14	□□□□□ -0.79
CACNB4-256	ENST00000637535	KIF15	Q9NS87	1388 aa		10.14	□□□□□ -0.79
CACNB4-256	ENST00000637535	DUOX2	Q9NRD8	1548 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	IDI1	Q13907	227 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	BCAN	Q96GW7	911 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	EID1	Q9Y6B2	187 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	TMEM94	Q12767	1356 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	ARHGAP23	Q9P227	1491 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	UBE2Q2	Q8WVN8	375 aa		10.13	□□□□□ -0.79
CACNB4-256	ENST00000637535	ABCC5	O15440	1437 aa		10.12	□□□□□ -0.79
CACNB4-256	ENST00000637535	PROSER2	Q86WR7	435 aa	Predicted RBP	10.12	□□□□□ -0.79
CACNB4-256	ENST00000637535	DAXX	Q9UER7	740 aa	Predicted RBP	10.12	□□□□□ -0.79
CACNB4-256	ENST00000637535	SLIT1	O75093	1534 aa		10.12	□□□□□ -0.79
CACNB4-256	ENST00000637535	TMEM2	Q9UHN6	1383 aa		10.11	□□□□□ -0.79
CACNB4-256	ENST00000637535	ROBO1	Q9Y6N7	1651 aa		10.1	□□□□□ -0.79
CACNB4-256	ENST00000637535	PRDM15	P57071	1507 aa	Predicted RBP	10.1	□□□□□ -0.79
CACNB4-256	ENST00000637535	CROCC2	H7BZ55	1655 aa		10.1	□□□□□ -0.79
CACNB4-256	ENST00000637535	PTPN23	Q9H3S7	1636 aa		10.1	□□□□□ -0.79
CACNB4-256	ENST00000637535	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.1	□□□□□ -0.79
CACNB4-256	ENST00000637535	SETD1A	O15047	1707 aa	Known RBP	10.1	□□□□□ -0.79
CACNB4-256	ENST00000637535	DAPK1	P53355	1430 aa		10.09	□□□□□ -0.79
CACNB4-256	ENST00000637535	KCNA6	P17658	529 aa		10.08	□□□□□ -0.8
CACNB4-256	ENST00000637535	MYO5B	Q9ULV0	1848 aa		10.08	□□□□□ -0.8
CACNB4-256	ENST00000637535	MAP3K1	Q13233	1512 aa		10.08	□□□□□ -0.8
CACNB4-256	ENST00000637535	EFCAB6	Q5THR3	1501 aa		10.08	□□□□□ -0.8
CACNB4-256	ENST00000637535	ARHGAP31	Q2M1Z3	1444 aa		10.08	□□□□□ -0.8
CACNB4-256	ENST00000637535	ERBIN	Q96RT1	1412 aa		10.08	□□□□□ -0.8
CACNB4-256	ENST00000637535	FAM135B	Q49AJ0	1406 aa		10.07	□□□□□ -0.8
CACNB4-256	ENST00000637535	KANK1	Q14678	1352 aa		10.07	□□□□□ -0.8
CACNB4-256	ENST00000637535	TET3	O43151	1660 aa		10.07	□□□□□ -0.8
CACNB4-256	ENST00000637535	CHGA	P10645	457 aa	Known RBP	10.06	□□□□□ -0.8
CACNB4-256	ENST00000637535	FAM50A	Q14320	339 aa	Known RBP	10.05	□□□□□ -0.8
CACNB4-256	ENST00000637535	RBM42	Q9BTD8	480 aa	Known RBP	10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	SLAIN2	Q9P270	581 aa		10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	PHLPP1	O60346	1717 aa		10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	FGD6	Q6ZV73	1430 aa		10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	EIF5B	O60841	1220 aa	Known RBP	10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	ERICH6B	Q5W0A0	696 aa		10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.04	□□□□□ -0.8
CACNB4-256	ENST00000637535	ANKRD30A	Q9BXX3	1397 aa		10.03	□□□□□ -0.8
CACNB4-256	ENST00000637535	PPP1R15A	O75807	674 aa	Predicted RBP	10.03	□□□□□ -0.8
CACNB4-256	ENST00000637535	PLSCR2	Q9NRY7	297 aa		10.03	□□□□□ -0.8
CACNB4-256	ENST00000637535	MSH6	P52701	1360 aa		10.03	□□□□□ -0.8
CACNB4-256	ENST00000637535	NOS1	P29475	1434 aa		10.03	□□□□□ -0.8
CACNB4-256	ENST00000637535	ADGRB3	O60242	1522 aa		10.02	□□□□□ -0.8
CACNB4-256	ENST00000637535	C14orf37	Q86TY3	774 aa		10.02	□□□□□ -0.8
CACNB4-256	ENST00000637535	TRIM52	Q96A61	297 aa		10.02	□□□□□ -0.8
CACNB4-256	ENST00000637535	GCC2	Q8IWJ2	1684 aa		10.02	□□□□□ -0.81
CACNB4-256	ENST00000637535	CHD2	O14647	1828 aa	Known RBP	10.01	□□□□□ -0.81
CACNB4-256	ENST00000637535	LMTK2	Q8IWU2	1503 aa		10	□□□□□ -0.81
CACNB4-256	ENST00000637535	ANO8	Q9HCE9	1232 aa	Predicted RBP	10	□□□□□ -0.81
CACNB4-256	ENST00000637535	SRCAP	Q6ZRS2	3230 aa		10	□□□□□ -0.81
CACNB4-256	ENST00000637535	RIMS2	Q9UQ26	1411 aa		10	□□□□□ -0.81
CACNB4-256	ENST00000637535	NWD1	Q149M9	1564 aa		10	□□□□□ -0.81
CACNB4-256	ENST00000637535	LRP6	O75581	1613 aa		10	□□□□□ -0.81
CACNB4-256	ENST00000637535	KDM5A	P29375	1690 aa	Known RBP	10	□□□□□ -0.81
CACNB4-256	ENST00000637535	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	NUTM2E	B1AL46	878 aa	Predicted RBP	9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	SLC52A1	Q9NWF4	448 aa		9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	NKTR	P30414	1462 aa	Known RBP	9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	ZFYVE9	O95405	1425 aa		9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	JCAD	Q9P266	1359 aa		9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	MEX3C	Q5U5Q3	659 aa	Known RBP	9.99	□□□□□ -0.81
CACNB4-256	ENST00000637535	COL16A1	Q07092	1604 aa	Predicted RBP	9.98	□□□□□ -0.81
CACNB4-256	ENST00000637535	ANKRD50	Q9ULJ7	1429 aa		9.98	□□□□□ -0.81
CACNB4-256	ENST00000637535	ITGAE	P38570	1179 aa		9.98	□□□□□ -0.81
CACNB4-256	ENST00000637535	TMEM131L	A2VDJ0	1609 aa		9.97	□□□□□ -0.81
CACNB4-256	ENST00000637535	PLEKHG1	Q9ULL1	1385 aa		9.97	□□□□□ -0.81
CACNB4-256	ENST00000637535	SPDYE2B	A6NHP3	402 aa		9.97	□□□□□ -0.81
CACNB4-256	ENST00000637535	SPDYE6	P0CI01	402 aa		9.97	□□□□□ -0.81
CACNB4-256	ENST00000637535	SPDYE2	Q495Y8	402 aa		9.97	□□□□□ -0.81
CACNB4-256	ENST00000637535	DDX17	Q92841	729 aa	Known RBP	9.97	□□□□□ -0.81
CACNB4-256	ENST00000637535	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	9.96	□□□□□ -0.81
CACNB4-256	ENST00000637535	ADAMTS13	Q76LX8	1427 aa		9.96	□□□□□ -0.82
CACNB4-256	ENST00000637535	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.96	□□□□□ -0.82
CACNB4-256	ENST00000637535	AMOTL2	Q9Y2J4	779 aa		9.96	□□□□□ -0.82
CACNB4-256	ENST00000637535		E9PCH4	1651 aa		9.95	□□□□□ -0.82
CACNB4-256	ENST00000637535	ATF3	P18847	181 aa		9.95	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 87 ms