RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 GCC2Q8IWJ2 1684 aa10.23□□□□□ -0.77
UPF3B-205ENST00000636792 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
UPF3B-205ENST00000636792 BCORL1Q5H9F3 1711 aa10.23□□□□□ -0.77
UPF3B-205ENST00000636792 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
UPF3B-205ENST00000636792 ROCK1Q13464 1354 aa10.22□□□□□ -0.77
UPF3B-205ENST00000636792 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
UPF3B-205ENST00000636792 ABCC5O15440 1437 aa10.21□□□□□ -0.78
UPF3B-205ENST00000636792 C9orf84Q5VXU9 1444 aa10.21□□□□□ -0.78
UPF3B-205ENST00000636792 TRAPPC8Q9Y2L5 1435 aa10.21□□□□□ -0.78
UPF3B-205ENST00000636792 ABCA6Q8N139 1617 aa10.2□□□□□ -0.78
UPF3B-205ENST00000636792 FAM135AQ9P2D6 1515 aa10.2□□□□□ -0.78
UPF3B-205ENST00000636792 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
UPF3B-205ENST00000636792 DIP2CQ9Y2E4 1556 aa10.2□□□□□ -0.78
UPF3B-205ENST00000636792 DUOX2Q9NRD8 1548 aa10.19□□□□□ -0.78
UPF3B-205ENST00000636792 COL17A1Q9UMD9 1497 aaPredicted RBP10.19□□□□□ -0.78
UPF3B-205ENST00000636792 ACIN1Q9UKV3 1341 aaKnown RBP10.19□□□□□ -0.78
UPF3B-205ENST00000636792 EMP3P54852 163 aa10.19□□□□□ -0.78
UPF3B-205ENST00000636792 ANKRD30AQ9BXX3 1397 aa10.18□□□□□ -0.78
UPF3B-205ENST00000636792 ZNF644Q9H582 1327 aaPredicted RBP10.18□□□□□ -0.78
UPF3B-205ENST00000636792 TSPY4P0CV99 314 aa10.18□□□□□ -0.78
UPF3B-205ENST00000636792 TSPY10P0CW01 314 aa10.18□□□□□ -0.78
UPF3B-205ENST00000636792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.18□□□□□ -0.78
UPF3B-205ENST00000636792 AGLP35573 1532 aa10.17□□□□□ -0.78
UPF3B-205ENST00000636792 ERBINQ96RT1 1412 aa10.17□□□□□ -0.78
UPF3B-205ENST00000636792 SPAG9O60271 1321 aaKnown RBP10.17□□□□□ -0.78
UPF3B-205ENST00000636792 FAM50AQ14320 339 aaKnown RBP10.17□□□□□ -0.78
UPF3B-205ENST00000636792 HFM1A2PYH4 1435 aa10.16□□□□□ -0.78
UPF3B-205ENST00000636792 CHRM1P11229 460 aaPredicted RBP10.16□□□□□ -0.78
UPF3B-205ENST00000636792 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.78
UPF3B-205ENST00000636792 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
UPF3B-205ENST00000636792 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
UPF3B-205ENST00000636792 RNF17Q9BXT8 1623 aaKnown RBP10.15□□□□□ -0.78
UPF3B-205ENST00000636792 PSEN1P49768 467 aa10.15□□□□□ -0.78
UPF3B-205ENST00000636792 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
UPF3B-205ENST00000636792 ATP10AO60312 1499 aa10.15□□□□□ -0.78
UPF3B-205ENST00000636792 DEPDC5O75140 1603 aa10.15□□□□□ -0.79
UPF3B-205ENST00000636792 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-205ENST00000636792 A2MP01023 1474 aa10.14□□□□□ -0.79
UPF3B-205ENST00000636792 ZC3H13Q5T200 1668 aaKnown RBP10.14□□□□□ -0.79
UPF3B-205ENST00000636792 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
UPF3B-205ENST00000636792 AFAP1Q8N556 730 aa10.13□□□□□ -0.79
UPF3B-205ENST00000636792 UNC13BO14795 1591 aa10.13□□□□□ -0.79
UPF3B-205ENST00000636792 PRDM15P57071 1507 aaPredicted RBP10.12□□□□□ -0.79
UPF3B-205ENST00000636792 RAPGEF3O95398 923 aa10.12□□□□□ -0.79
UPF3B-205ENST00000636792 PTPRKQ15262 1439 aa10.12□□□□□ -0.79
UPF3B-205ENST00000636792 DHX29Q7Z478 1369 aaKnown RBP10.12□□□□□ -0.79
UPF3B-205ENST00000636792 YEATS2Q9ULM3 1422 aa10.11□□□□□ -0.79
UPF3B-205ENST00000636792 G3V3G9 751 aa10.11□□□□□ -0.79
UPF3B-205ENST00000636792 NAIPQ13075 1403 aa10.1□□□□□ -0.79
UPF3B-205ENST00000636792 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
UPF3B-205ENST00000636792 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
UPF3B-205ENST00000636792 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
UPF3B-205ENST00000636792 KDM5DQ9BY66 1539 aa10.1□□□□□ -0.79
UPF3B-205ENST00000636792 FAM205CA6NFA0 338 aa10.09□□□□□ -0.79
UPF3B-205ENST00000636792 MROH2AA6NES4 1674 aa10.09□□□□□ -0.79
UPF3B-205ENST00000636792 VWDEQ8N2E2 1590 aa10.08□□□□□ -0.8
UPF3B-205ENST00000636792 IQGAP3Q86VI3 1631 aa10.07□□□□□ -0.8
UPF3B-205ENST00000636792 MROH1Q8NDA8 1641 aa10.07□□□□□ -0.8
UPF3B-205ENST00000636792 HRCP23327 699 aa10.07□□□□□ -0.8
UPF3B-205ENST00000636792 SIGLEC1Q9BZZ2 1709 aa10.07□□□□□ -0.8
UPF3B-205ENST00000636792 LMTK2Q8IWU2 1503 aa10.07□□□□□ -0.8
UPF3B-205ENST00000636792 SETD5Q9C0A6 1442 aa10.07□□□□□ -0.8
UPF3B-205ENST00000636792 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
UPF3B-205ENST00000636792 FER1L4A9Z1Z3 1794 aa10.06□□□□□ -0.8
UPF3B-205ENST00000636792 CNTLNQ9NXG0 1405 aa10.05□□□□□ -0.8
UPF3B-205ENST00000636792 TET3O43151 1660 aa10.05□□□□□ -0.8
UPF3B-205ENST00000636792 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
UPF3B-205ENST00000636792 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-205ENST00000636792 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
UPF3B-205ENST00000636792 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
UPF3B-205ENST00000636792 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
UPF3B-205ENST00000636792 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
UPF3B-205ENST00000636792 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
UPF3B-205ENST00000636792 KANK1Q14678 1352 aa10.02□□□□□ -0.8
UPF3B-205ENST00000636792 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 ITGAEP38570 1179 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 RRP7BPQ9NSQ0 103 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.81
UPF3B-205ENST00000636792 EFCAB6Q5THR3 1501 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 CEP152O94986 1710 aa10.02□□□□□ -0.81
UPF3B-205ENST00000636792 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
UPF3B-205ENST00000636792 ABCC3O15438 1527 aa10.01□□□□□ -0.81
UPF3B-205ENST00000636792 RAB3GAP2Q9H2M9 1393 aa10.01□□□□□ -0.81
UPF3B-205ENST00000636792 ARHGAP31Q2M1Z3 1444 aa10□□□□□ -0.81
UPF3B-205ENST00000636792 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
UPF3B-205ENST00000636792 CLTCQ00610 1675 aaKnown RBP9.99□□□□□ -0.81
UPF3B-205ENST00000636792 SPOCK2Q92563 424 aa9.99□□□□□ -0.81
UPF3B-205ENST00000636792 MADDQ8WXG6 1647 aa9.98□□□□□ -0.81
UPF3B-205ENST00000636792 KIF3BO15066 747 aa9.98□□□□□ -0.81
UPF3B-205ENST00000636792 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
UPF3B-205ENST00000636792 PZPP20742 1482 aa9.97□□□□□ -0.81
UPF3B-205ENST00000636792 E9PCH4 1651 aa9.96□□□□□ -0.81
UPF3B-205ENST00000636792 C3P01024 1663 aa9.96□□□□□ -0.81
UPF3B-205ENST00000636792 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
UPF3B-205ENST00000636792 SPHKAPQ2M3C7 1700 aa9.96□□□□□ -0.81
UPF3B-205ENST00000636792 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
UPF3B-205ENST00000636792 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms