RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 BRD4O60885 1362 aaPredicted RBP16.86■□□□□ 0.29
PTPN11-205ENST00000635625 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
PTPN11-205ENST00000635625 CLTCL1P53675 1640 aa16.85■□□□□ 0.29
PTPN11-205ENST00000635625 LMTK2Q8IWU2 1503 aa16.84■□□□□ 0.29
PTPN11-205ENST00000635625 ZNF518AQ6AHZ1 1483 aa16.84■□□□□ 0.29
PTPN11-205ENST00000635625 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
PTPN11-205ENST00000635625 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
PTPN11-205ENST00000635625 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.29
PTPN11-205ENST00000635625 ZMYM4Q5VZL5 1548 aa16.83■□□□□ 0.29
PTPN11-205ENST00000635625 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
PTPN11-205ENST00000635625 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
PTPN11-205ENST00000635625 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
PTPN11-205ENST00000635625 KIDINS220Q9ULH0 1771 aa16.82■□□□□ 0.28
PTPN11-205ENST00000635625 INSRP06213 1382 aa16.81■□□□□ 0.28
PTPN11-205ENST00000635625 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
PTPN11-205ENST00000635625 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
PTPN11-205ENST00000635625 MYOM2P54296 1465 aa16.8■□□□□ 0.28
PTPN11-205ENST00000635625 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
PTPN11-205ENST00000635625 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
PTPN11-205ENST00000635625 GLI2P10070 1586 aa16.79■□□□□ 0.28
PTPN11-205ENST00000635625 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
PTPN11-205ENST00000635625 KIF1BO60333 1816 aa16.79■□□□□ 0.28
PTPN11-205ENST00000635625 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
PTPN11-205ENST00000635625 TSHZ2Q9NRE2 1034 aa16.78■□□□□ 0.28
PTPN11-205ENST00000635625 TMF1P82094 1093 aa16.77■□□□□ 0.28
PTPN11-205ENST00000635625 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.28
PTPN11-205ENST00000635625 IFT172Q9UG01 1749 aa16.77■□□□□ 0.27
PTPN11-205ENST00000635625 TMC1Q8TDI8 760 aa16.77■□□□□ 0.27
PTPN11-205ENST00000635625 BCANQ96GW7 911 aa16.77■□□□□ 0.27
PTPN11-205ENST00000635625 TESK2Q96S53 571 aa16.77■□□□□ 0.27
PTPN11-205ENST00000635625 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
PTPN11-205ENST00000635625 SYNMO15061 1565 aa16.76■□□□□ 0.27
PTPN11-205ENST00000635625 HECW2Q9P2P5 1572 aa16.76■□□□□ 0.27
PTPN11-205ENST00000635625 MLH3Q9UHC1 1453 aa16.76■□□□□ 0.27
PTPN11-205ENST00000635625 EIF3AQ14152 1382 aaKnown RBP16.76■□□□□ 0.27
PTPN11-205ENST00000635625 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
PTPN11-205ENST00000635625 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
PTPN11-205ENST00000635625 NBPF1Q3BBV0 1214 aa16.75■□□□□ 0.27
PTPN11-205ENST00000635625 MAP3K4Q9Y6R4 1608 aa16.75■□□□□ 0.27
PTPN11-205ENST00000635625 POGZQ7Z3K3 1410 aa16.75■□□□□ 0.27
PTPN11-205ENST00000635625 MYT1Q01538 1121 aa16.74■□□□□ 0.27
PTPN11-205ENST00000635625 CDCA8Q53HL2 280 aa16.74■□□□□ 0.27
PTPN11-205ENST00000635625 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
PTPN11-205ENST00000635625 NEO1Q92859 1461 aa16.73■□□□□ 0.27
PTPN11-205ENST00000635625 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
PTPN11-205ENST00000635625 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
PTPN11-205ENST00000635625 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
PTPN11-205ENST00000635625 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
PTPN11-205ENST00000635625 KIF3BO15066 747 aa16.7■□□□□ 0.26
PTPN11-205ENST00000635625 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
PTPN11-205ENST00000635625 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
PTPN11-205ENST00000635625 ADGRB3O60242 1522 aa16.69■□□□□ 0.26
PTPN11-205ENST00000635625 MYO3AQ8NEV4 1616 aa16.69■□□□□ 0.26
PTPN11-205ENST00000635625 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
PTPN11-205ENST00000635625 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
PTPN11-205ENST00000635625 SETBP1Q9Y6X0 1596 aa16.68■□□□□ 0.26
PTPN11-205ENST00000635625 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
PTPN11-205ENST00000635625 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
PTPN11-205ENST00000635625 ZC3H13Q5T200 1668 aaKnown RBP16.66■□□□□ 0.26
PTPN11-205ENST00000635625 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
PTPN11-205ENST00000635625 NPC1L1Q9UHC9 1359 aa16.65■□□□□ 0.26
PTPN11-205ENST00000635625 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
PTPN11-205ENST00000635625 MYOM1P52179 1685 aa16.65■□□□□ 0.26
PTPN11-205ENST00000635625 PDE3BQ13370 1112 aa16.64■□□□□ 0.25
PTPN11-205ENST00000635625 BLMP54132 1417 aaPredicted RBP16.64■□□□□ 0.25
PTPN11-205ENST00000635625 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
PTPN11-205ENST00000635625 PPLO60437 1756 aa16.62■□□□□ 0.25
PTPN11-205ENST00000635625 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
PTPN11-205ENST00000635625 ABCC3O15438 1527 aa16.62■□□□□ 0.25
PTPN11-205ENST00000635625 PANK3Q9H999 370 aa16.61■□□□□ 0.25
PTPN11-205ENST00000635625 ASXL1Q8IXJ9 1541 aa16.61■□□□□ 0.25
PTPN11-205ENST00000635625 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
PTPN11-205ENST00000635625 RICTORQ6R327 1708 aa16.59■□□□□ 0.25
PTPN11-205ENST00000635625 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
PTPN11-205ENST00000635625 DIP2CQ9Y2E4 1556 aa16.58■□□□□ 0.25
PTPN11-205ENST00000635625 PIK3C2BO00750 1634 aa16.58■□□□□ 0.24
PTPN11-205ENST00000635625 NPATQ14207 1427 aa16.58■□□□□ 0.24
PTPN11-205ENST00000635625 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
PTPN11-205ENST00000635625 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
PTPN11-205ENST00000635625 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
PTPN11-205ENST00000635625 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
PTPN11-205ENST00000635625 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
PTPN11-205ENST00000635625 NOS1P29475 1434 aa16.54■□□□□ 0.24
PTPN11-205ENST00000635625 ERVK-7P63135 1459 aa16.53■□□□□ 0.24
PTPN11-205ENST00000635625 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
PTPN11-205ENST00000635625 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.24
PTPN11-205ENST00000635625 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
PTPN11-205ENST00000635625 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-205ENST00000635625 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
PTPN11-205ENST00000635625 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
PTPN11-205ENST00000635625 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
PTPN11-205ENST00000635625 ADGRB1O14514 1584 aa16.5■□□□□ 0.23
PTPN11-205ENST00000635625 SIGLEC1Q9BZZ2 1709 aa16.49■□□□□ 0.23
PTPN11-205ENST00000635625 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
PTPN11-205ENST00000635625 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
PTPN11-205ENST00000635625 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
PTPN11-205ENST00000635625 PPP2R1AP30153 589 aa16.47■□□□□ 0.23
PTPN11-205ENST00000635625 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
PTPN11-205ENST00000635625 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
PTPN11-205ENST00000635625 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms