RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 SPAG9O60271 1321 aaKnown RBP21.87■■□□□ 1.09
FARP1-242ENST00000627049 RTF1Q92541 710 aaKnown RBP21.86■■□□□ 1.09
FARP1-242ENST00000627049 ANKRD30BQ9BXX2 1392 aa21.86■■□□□ 1.09
FARP1-242ENST00000627049 MCM4P33991 863 aa21.86■■□□□ 1.09
FARP1-242ENST00000627049 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
FARP1-242ENST00000627049 PCF11O94913 1555 aaKnown RBP21.84■■□□□ 1.09
FARP1-242ENST00000627049 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
FARP1-242ENST00000627049 MAP7D2Q96T17 732 aa21.84■■□□□ 1.09
FARP1-242ENST00000627049 LMOD3Q0VAK6 560 aa21.83■■□□□ 1.09
FARP1-242ENST00000627049 C20orf194Q5TEA3 1177 aa21.83■■□□□ 1.09
FARP1-242ENST00000627049 MCTP1Q6DN14 999 aa21.83■■□□□ 1.09
FARP1-242ENST00000627049 GRPEL1Q9HAV7 217 aa21.83■■□□□ 1.09
FARP1-242ENST00000627049 R3HCC1Q9Y3T6 440 aaKnown RBP21.83■■□□□ 1.08
FARP1-242ENST00000627049 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
FARP1-242ENST00000627049 RRP9O43818 475 aaKnown RBP21.81■■□□□ 1.08
FARP1-242ENST00000627049 REC8O95072 547 aa21.81■■□□□ 1.08
FARP1-242ENST00000627049 AMER1Q5JTC6 1135 aaPredicted RBP21.81■■□□□ 1.08
FARP1-242ENST00000627049 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
FARP1-242ENST00000627049 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
FARP1-242ENST00000627049 ESPNB1AK53 854 aa21.81■■□□□ 1.08
FARP1-242ENST00000627049 TCP11L2Q8N4U5 519 aa21.81■■□□□ 1.08
FARP1-242ENST00000627049 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
FARP1-242ENST00000627049 NINLQ9Y2I6 1382 aa21.8■■□□□ 1.08
FARP1-242ENST00000627049 CCDC173Q0VFZ6 552 aa21.79■■□□□ 1.08
FARP1-242ENST00000627049 SLC4A10Q6U841 1118 aa21.79■■□□□ 1.08
FARP1-242ENST00000627049 DAPK1P53355 1430 aa21.79■■□□□ 1.08
FARP1-242ENST00000627049 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.084e-7■■■■□ 20.5
FARP1-242ENST00000627049 HTATSF1O43719 755 aaKnown RBP21.78■■□□□ 1.08
FARP1-242ENST00000627049 FOXD4L6Q3SYB3 417 aaPredicted RBP21.78■■□□□ 1.08
FARP1-242ENST00000627049 FOXD4L3Q6VB84 417 aaPredicted RBP21.78■■□□□ 1.08
FARP1-242ENST00000627049 SOX12O15370 315 aa21.78■■□□□ 1.08
FARP1-242ENST00000627049 SLFN5Q08AF3 891 aa21.78■■□□□ 1.08
FARP1-242ENST00000627049 MTERF4Q7Z6M4 381 aaKnown RBP21.78■■□□□ 1.08
FARP1-242ENST00000627049 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
FARP1-242ENST00000627049 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
FARP1-242ENST00000627049 RIPK4P57078 832 aa21.77■■□□□ 1.08
FARP1-242ENST00000627049 ATP6V1DQ9Y5K8 247 aa21.75■■□□□ 1.07
FARP1-242ENST00000627049 EVC2Q86UK5 1308 aa21.74■■□□□ 1.07
FARP1-242ENST00000627049 PTPN23Q9H3S7 1636 aa21.74■■□□□ 1.07
FARP1-242ENST00000627049 UBE2Q2Q8WVN8 375 aa21.74■■□□□ 1.07
FARP1-242ENST00000627049 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
FARP1-242ENST00000627049 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
FARP1-242ENST00000627049 CAVIN1Q6NZI2 390 aaKnown RBP21.73■■□□□ 1.07
FARP1-242ENST00000627049 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
FARP1-242ENST00000627049 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
FARP1-242ENST00000627049 CDC45O75419 566 aa21.72■■□□□ 1.07
FARP1-242ENST00000627049 CCDC39Q9UFE4 941 aa21.72■■□□□ 1.07
FARP1-242ENST00000627049 RILPL2Q969X0 211 aa21.72■■□□□ 1.07
FARP1-242ENST00000627049 TAOK2Q9UL54 1235 aa21.71■■□□□ 1.07
FARP1-242ENST00000627049 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
FARP1-242ENST00000627049 MTHFSP49914 203 aa21.7■■□□□ 1.06
FARP1-242ENST00000627049 ERBINQ96RT1 1412 aa21.7■■□□□ 1.06
FARP1-242ENST00000627049 DIAPH1O60610 1272 aaKnown RBP21.7■■□□□ 1.06
FARP1-242ENST00000627049 CIZ1Q9ULV3 898 aaPredicted RBP21.69■■□□□ 1.06
FARP1-242ENST00000627049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.69■■□□□ 1.064e-7■■□□□ 13.2
FARP1-242ENST00000627049 PLEKHH2Q8IVE3 1493 aa21.69■■□□□ 1.06
FARP1-242ENST00000627049 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
FARP1-242ENST00000627049 RNF214Q8ND24 703 aa21.67■■□□□ 1.06
FARP1-242ENST00000627049 MVPQ14764 893 aaKnown RBP21.66■■□□□ 1.06
FARP1-242ENST00000627049 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
FARP1-242ENST00000627049 EXOSC9Q06265 439 aaKnown RBP21.66■■□□□ 1.06
FARP1-242ENST00000627049 WDR63Q8IWG1 891 aa21.65■■□□□ 1.06
FARP1-242ENST00000627049 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
FARP1-242ENST00000627049 TBC1D2Q9BYX2 928 aa21.64■■□□□ 1.06
FARP1-242ENST00000627049 RABEP1Q15276 862 aa21.64■■□□□ 1.05
FARP1-242ENST00000627049 PTPRGP23470 1445 aa21.64■■□□□ 1.05
FARP1-242ENST00000627049 C9orf84Q5VXU9 1444 aa21.64■■□□□ 1.05
FARP1-242ENST00000627049 K7ELQ4 463 aaPredicted RBP21.63■■□□□ 1.05
FARP1-242ENST00000627049 PRPF40AO75400 957 aaKnown RBP21.63■■□□□ 1.05
FARP1-242ENST00000627049 MBD3O95983 291 aa21.63■■□□□ 1.05
FARP1-242ENST00000627049 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
FARP1-242ENST00000627049 TNNT3P45378 269 aaPredicted RBP21.63■■□□□ 1.05
FARP1-242ENST00000627049 ZNF771Q7L3S4 317 aaPredicted RBP21.63■■□□□ 1.05
FARP1-242ENST00000627049 GPATCH3Q96I76 525 aa21.63■■□□□ 1.05
FARP1-242ENST00000627049 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
FARP1-242ENST00000627049 A0A0G2JS52 829 aa21.61■■□□□ 1.05
FARP1-242ENST00000627049 ANO2Q9NQ90 1003 aa21.61■■□□□ 1.05
FARP1-242ENST00000627049 WWC1Q8IX03 1113 aa21.61■■□□□ 1.05
FARP1-242ENST00000627049 TPM4P67936 248 aa21.61■■□□□ 1.05
FARP1-242ENST00000627049 GCC1Q96CN9 775 aa21.61■■□□□ 1.05
FARP1-242ENST00000627049 VGFO15240 615 aaPredicted RBP21.61■■□□□ 1.05
FARP1-242ENST00000627049 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
FARP1-242ENST00000627049 CT47B1P0C2W7 299 aaPredicted RBP21.6■■□□□ 1.05
FARP1-242ENST00000627049 GNAI1P63096 354 aa21.6■■□□□ 1.05
FARP1-242ENST00000627049 ZSCAN30Q86W11 494 aa21.6■■□□□ 1.05
FARP1-242ENST00000627049 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
FARP1-242ENST00000627049 CHMP4AQ9BY43 222 aa21.59■■□□□ 1.05
FARP1-242ENST00000627049 LRPPRCP42704 1394 aaKnown RBP21.59■■□□□ 1.05
FARP1-242ENST00000627049 TROQ12816 1431 aaPredicted RBP21.59■■□□□ 1.05
FARP1-242ENST00000627049 TSR2Q969E8 191 aaKnown RBP21.59■■□□□ 1.05
FARP1-242ENST00000627049 NOB1Q9ULX3 412 aaKnown RBP21.59■■□□□ 1.05
FARP1-242ENST00000627049 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
FARP1-242ENST00000627049 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
FARP1-242ENST00000627049 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
FARP1-242ENST00000627049 DIAPH3Q9NSV4 1193 aa21.59■■□□□ 1.05
FARP1-242ENST00000627049 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.05
FARP1-242ENST00000627049 ATF7IPQ6VMQ6 1270 aa21.58■■□□□ 1.05
FARP1-242ENST00000627049 ABCC5O15440 1437 aa21.58■■□□□ 1.05
FARP1-242ENST00000627049 PRG4Q92954 1404 aaPredicted RBP21.58■■□□□ 1.05
FARP1-242ENST00000627049 GOLGA6L19H0YKK7 550 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms